This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OLGC] human gut metagenome; faeces
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183040363
OLGC01000919
[OLGC] human gut metagenome; faeces
75
162
+
Leu
TAA
[ENA]
¢þ
>WENV183040362
OLGC01000857
[OLGC] human gut metagenome; faeces
79
164
+
Tyr
GTA
[ENA]
¢þ
>WENV183040332
OLGC01000063
[OLGC] human gut metagenome; faeces
80
151
+
Gln
CTG
[ENA]
¢þ
>WENV183040342
OLGC01000130
[OLGC] human gut metagenome; faeces
88
163
+
His
GTG
[ENA]
¢þ
>WENV183040333
OLGC01000072
[OLGC] human gut metagenome; faeces
108
18
-
Ser
GCT
[ENA]
¢þ
>WENV183040345
OLGC01000136
[OLGC] human gut metagenome; faeces
147
218
+
Gln
TTG
[ENA]
¢þ
>WENV183040366
OLGC01001261
[OLGC] human gut metagenome; faeces
162
238
+
Ala
GGC
[ENA]
¢þ
>WENV183040364
OLGC01001026
[OLGC] human gut metagenome; faeces
185
110
-
Val
TAC
[ENA]
¢þ
>WENV183040346
OLGC01000215
[OLGC] human gut metagenome; faeces
288
216
-
Arg
CCT
[ENA]
¢þ
>WENV183040365
OLGC01001229
[OLGC] human gut metagenome; faeces
412
486
+
Ile2
CAT
[ENA]
¢þ
>WENV183040361
OLGC01000366
[OLGC] human gut metagenome; faeces
659
743
+
Leu
CAA
[ENA]
¢þ
>WENV183040360
OLGC01000294
[OLGC] human gut metagenome; faeces
892
965
+
fMet
CAT
[ENA]
¢þ
>WENV183040329
OLGC01000002
[OLGC] human gut metagenome; faeces
1248
1175
-
Lys
TTT
[ENA]
¢þ
>WENV183040356
OLGC01000274
[OLGC] human gut metagenome; faeces
1883
1957
+
Pro
TGG
[ENA]
¢þ
>WENV183040359
OLGC01000280
[OLGC] human gut metagenome; faeces
2404
2331
-
Trp
CCA
[ENA]
¢þ
>WENV183040355
OLGC01000257
[OLGC] human gut metagenome; faeces
3517
3592
+
Arg
TCT
[ENA]
¢þ
>WENV183040358
OLGC01000280
[OLGC] human gut metagenome; faeces
3804
3732
-
Thr
GGT
[ENA]
¢þ
>WENV183040357
OLGC01000280
[OLGC] human gut metagenome; faeces
3986
3904
-
Tyr
GTA
[ENA]
¢þ
>WENV183040354
OLGC01000246
[OLGC] human gut metagenome; faeces
4125
4198
+
Lys
CTT
[ENA]
¢þ
>WENV183040353
OLGC01000234
[OLGC] human gut metagenome; faeces
4152
4079
-
His
GTG
[ENA]
¢þ
>WENV183040352
OLGC01000234
[OLGC] human gut metagenome; faeces
4229
4158
-
Sup
TCA
[ENA]
¢þ
>WENV183040351
OLGC01000234
[OLGC] human gut metagenome; faeces
4313
4242
-
Gln
TTG
[ENA]
¢þ
>WENV183040350
OLGC01000234
[OLGC] human gut metagenome; faeces
4402
4320
-
Tyr
GTA
[ENA]
¢þ
>WENV183040349
OLGC01000234
[OLGC] human gut metagenome; faeces
4484
4411
-
Phe
GAA
[ENA]
¢þ
>WENV183040348
OLGC01000234
[OLGC] human gut metagenome; faeces
4564
4493
-
Gln
CTG
[ENA]
¢þ
>WENV183040347
OLGC01000234
[OLGC] human gut metagenome; faeces
4656
4570
-
Ser
TGA
[ENA]
¢þ
>WENV183040344
OLGC01000134
[OLGC] human gut metagenome; faeces
4737
4666
-
Gly
CCC
[ENA]
¢þ
>WENV183040341
OLGC01000120
[OLGC] human gut metagenome; faeces
4762
4678
-
Leu
TAG
[ENA]
¢þ
>WENV183040343
OLGC01000134
[OLGC] human gut metagenome; faeces
4842
4769
-
Thr
CGT
[ENA]
¢þ
>WENV183040339
OLGC01000110
[OLGC] human gut metagenome; faeces
5165
5092
-
Phe
GAA
[ENA]
¢þ
>WENV183040334
OLGC01000081
[OLGC] human gut metagenome; faeces
5202
5275
+
Phe
GAA
[ENA]
¢þ
>WENV183040338
OLGC01000110
[OLGC] human gut metagenome; faeces
5321
5396
+
Pro
CGG
[ENA]
¢þ
>WENV183040336
OLGC01000088
[OLGC] human gut metagenome; faeces
5594
5665
+
Cys
GCA
[ENA]
¢þ
>WENV183040340
OLGC01000112
[OLGC] human gut metagenome; faeces
5871
5783
-
Ser
GGA
[ENA]
¢þ
>WENV183040337
OLGC01000107
[OLGC] human gut metagenome; faeces
8045
7971
-
Met
CAT
[ENA]
¢þ
>WENV183040335
OLGC01000081
[OLGC] human gut metagenome; faeces
8838
8923
+
Ser
TGA
[ENA]
¢þ
>WENV183040331
OLGC01000004
[OLGC] human gut metagenome; faeces
13460
13386
-
Asn
GTT
[ENA]
¢þ
>WENV183040330
OLGC01000004
[OLGC] human gut metagenome; faeces
13584
13510
-
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK