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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OLJL] human gut metagenome; human gut
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183087622
OLJL01000611
[OLJL] human gut metagenome; human gut
62
154
+
Ser
TGA
[ENA]
¢þ
>WENV183087573
OLJL01000021
[OLJL] human gut metagenome; human gut
123
36
-
Ser
TGA
[ENA]
¢þ
>WENV183087623
OLJL01000611
[OLJL] human gut metagenome; human gut
164
239
+
fMet
CAT
[ENA]
¢þ
>WENV183087593
OLJL01000133
[OLJL] human gut metagenome; human gut
209
298
+
Ser
GGA
[ENA]
¢þ
>WENV183087590
OLJL01000090
[OLJL] human gut metagenome; human gut
220
135
-
Leu
CAA
[ENA]
¢þ
>WENV183087570
OLJL01000020
[OLJL] human gut metagenome; human gut
250
322
+
Val
CAC
[ENA]
¢þ
>WENV183087589
OLJL01000090
[OLJL] human gut metagenome; human gut
302
229
-
Gln
TTG
[ENA]
¢þ
>WENV183087624
OLJL01000611
[OLJL] human gut metagenome; human gut
342
416
+
Phe
GAA
[ENA]
¢þ
>WENV183087588
OLJL01000090
[OLJL] human gut metagenome; human gut
394
320
-
His
GTG
[ENA]
¢þ
>WENV183087625
OLJL01000611
[OLJL] human gut metagenome; human gut
429
502
+
His
GTG
[ENA]
¢þ
>WENV183087587
OLJL01000090
[OLJL] human gut metagenome; human gut
477
405
-
Trp
CCA
[ENA]
¢þ
>WENV183087626
OLJL01000611
[OLJL] human gut metagenome; human gut
514
585
+
Gln
TTG
[ENA]
¢þ
>WENV183087627
OLJL01000611
[OLJL] human gut metagenome; human gut
591
664
+
Cys
GCA
[ENA]
¢þ
>WENV183087617
OLJL01000294
[OLJL] human gut metagenome; human gut
720
631
-
Ser
GCT
[ENA]
¢þ
>WENV183087616
OLJL01000294
[OLJL] human gut metagenome; human gut
798
723
-
Ile
GAT
[ENA]
¢þ
>WENV183087599
OLJL01000209
[OLJL] human gut metagenome; human gut
851
776
-
Lys
CTT
[ENA]
¢þ
>WENV183087615
OLJL01000294
[OLJL] human gut metagenome; human gut
902
830
-
Gly
TCC
[ENA]
¢þ
>WENV183087614
OLJL01000294
[OLJL] human gut metagenome; human gut
991
917
-
Phe
GAA
[ENA]
¢þ
>WENV183087613
OLJL01000294
[OLJL] human gut metagenome; human gut
1067
994
-
fMet
CAT
[ENA]
¢þ
>WENV183087612
OLJL01000294
[OLJL] human gut metagenome; human gut
1166
1077
-
Ser
TGA
[ENA]
¢þ
>WENV183087611
OLJL01000294
[OLJL] human gut metagenome; human gut
1251
1176
-
Ile2
CAT
[ENA]
¢þ
>WENV183087610
OLJL01000294
[OLJL] human gut metagenome; human gut
1341
1266
-
Met
CAT
[ENA]
¢þ
>WENV183087591
OLJL01000099
[OLJL] human gut metagenome; human gut
1358
1429
+
Arg
CCG
[ENA]
¢þ
>WENV183087609
OLJL01000294
[OLJL] human gut metagenome; human gut
1421
1346
-
Pro
TGG
[ENA]
¢þ
>WENV183087619
OLJL01000366
[OLJL] human gut metagenome; human gut
1484
1395
-
Ser
CGA
[ENA]
¢þ
>WENV183087608
OLJL01000294
[OLJL] human gut metagenome; human gut
1513
1440
-
Arg
ACG
[ENA]
¢þ
>WENV183087618
OLJL01000366
[OLJL] human gut metagenome; human gut
1572
1487
-
Leu
CAG
[ENA]
¢þ
>WENV183087607
OLJL01000294
[OLJL] human gut metagenome; human gut
1618
1533
-
Leu
TAA
[ENA]
¢þ
>WENV183087606
OLJL01000294
[OLJL] human gut metagenome; human gut
1697
1626
-
Gly
GCC
[ENA]
¢þ
>WENV183087605
OLJL01000294
[OLJL] human gut metagenome; human gut
1793
1721
-
Thr
TGT
[ENA]
¢þ
>WENV183087567
OLJL01000018
[OLJL] human gut metagenome; human gut
1804
1879
+
His
GTG
[ENA]
¢þ
>WENV183087595
OLJL01000188
[OLJL] human gut metagenome; human gut
1842
1769
-
Gly
TCC
[ENA]
¢þ
>WENV183087604
OLJL01000294
[OLJL] human gut metagenome; human gut
1893
1810
-
Leu
TAG
[ENA]
¢þ
>WENV183087621
OLJL01000377
[OLJL] human gut metagenome; human gut
1902
1826
-
Ile
GAT
[ENA]
¢þ
>WENV183087620
OLJL01000372
[OLJL] human gut metagenome; human gut
1932
1858
-
Ala
TGC
[ENA]
¢þ
>WENV183087594
OLJL01000188
[OLJL] human gut metagenome; human gut
1948
2022
+
Pro
TGG
[ENA]
¢þ
>WENV183087603
OLJL01000294
[OLJL] human gut metagenome; human gut
1971
1899
-
Lys
TTT
[ENA]
¢þ
>WENV183087602
OLJL01000294
[OLJL] human gut metagenome; human gut
2068
1996
-
Asp
GTC
[ENA]
¢þ
>WENV183087586
OLJL01000078
[OLJL] human gut metagenome; human gut
2120
2194
+
Thr
GGT
[ENA]
¢þ
>WENV183087601
OLJL01000294
[OLJL] human gut metagenome; human gut
2144
2070
-
Val
TAC
[ENA]
¢þ
>WENV183087596
OLJL01000194
[OLJL] human gut metagenome; human gut
2715
2786
+
Arg
CCT
[ENA]
¢þ
>WENV183087600
OLJL01000242
[OLJL] human gut metagenome; human gut
2793
2865
+
Thr
CGT
[ENA]
¢þ
>WENV183087584
OLJL01000051
[OLJL] human gut metagenome; human gut
3445
3521
+
Leu
TAA
[ENA]
¢þ
>WENV183087597
OLJL01000195
[OLJL] human gut metagenome; human gut
4115
4190
+
Val
TAC
[ENA]
¢þ
>WENV183087598
OLJL01000195
[OLJL] human gut metagenome; human gut
4197
4272
+
Thr
TGT
[ENA]
¢þ
>WENV183087592
OLJL01000128
[OLJL] human gut metagenome; human gut
6388
6315
-
Gly
GCC
[ENA]
¢þ
>WENV183087553
OLJL01000005
[OLJL] human gut metagenome; human gut
7922
7848
-
Val
TAC
[ENA]
¢þ
>WENV183087551
OLJL01000002
[OLJL] human gut metagenome; human gut
8090
8015
-
Thr
CGT
[ENA]
¢þ
>WENV183087554
OLJL01000007
[OLJL] human gut metagenome; human gut
8795
8868
+
Arg
CCG
[ENA]
¢þ
>WENV183087576
OLJL01000026
[OLJL] human gut metagenome; human gut
9520
9445
-
Thr
TGT
[ENA]
¢þ
>WENV183087582
OLJL01000038
[OLJL] human gut metagenome; human gut
11042
10968
-
Ile2
CAT
[ENA]
¢þ
>WENV183087574
OLJL01000022
[OLJL] human gut metagenome; human gut
11180
11253
+
Arg
CCT
[ENA]
¢þ
>WENV183087581
OLJL01000038
[OLJL] human gut metagenome; human gut
11676
11748
+
Asn
GTT
[ENA]
¢þ
>WENV183087579
OLJL01000032
[OLJL] human gut metagenome; human gut
13092
13019
-
Arg
ACG
[ENA]
¢þ
>WENV183087561
OLJL01000009
[OLJL] human gut metagenome; human gut
13835
13764
-
Gln
TTG
[ENA]
¢þ
>WENV183087566
OLJL01000017
[OLJL] human gut metagenome; human gut
14975
14902
-
Ala
GGC
[ENA]
¢þ
>WENV183087565
OLJL01000014
[OLJL] human gut metagenome; human gut
16410
16336
-
Asp
GTC
[ENA]
¢þ
>WENV183087564
OLJL01000014
[OLJL] human gut metagenome; human gut
16531
16458
-
Glu
TTC
[ENA]
¢þ
>WENV183087585
OLJL01000052
[OLJL] human gut metagenome; human gut
16729
16653
-
Leu
CAA
[ENA]
¢þ
>WENV183087577
OLJL01000031
[OLJL] human gut metagenome; human gut
18394
18468
+
fMet
CAT
[ENA]
¢þ
>WENV183087578
OLJL01000032
[OLJL] human gut metagenome; human gut
18702
18789
+
Ser
GCT
[ENA]
¢þ
>WENV183087583
OLJL01000046
[OLJL] human gut metagenome; human gut
19422
19492
+
Cys
GCA
[ENA]
¢þ
>WENV183087580
OLJL01000035
[OLJL] human gut metagenome; human gut
20581
20493
-
Leu
GAG
[ENA]
¢þ
>WENV183087572
OLJL01000021
[OLJL] human gut metagenome; human gut
20831
20918
+
Ser
GGA
[ENA]
¢þ
>WENV183087569
OLJL01000018
[OLJL] human gut metagenome; human gut
21106
21031
-
Glu
CTC
[ENA]
¢þ
>WENV183087568
OLJL01000018
[OLJL] human gut metagenome; human gut
21206
21134
-
Gln
CTG
[ENA]
¢þ
>WENV183087571
OLJL01000020
[OLJL] human gut metagenome; human gut
22897
22823
-
Pro
GGG
[ENA]
¢þ
>WENV183087560
OLJL01000009
[OLJL] human gut metagenome; human gut
23069
22994
-
Trp
CCA
[ENA]
¢þ
>WENV183087563
OLJL01000014
[OLJL] human gut metagenome; human gut
25293
25218
-
Lys
TTT
[ENA]
¢þ
>WENV183087575
OLJL01000022
[OLJL] human gut metagenome; human gut
29138
29213
+
Ala
CGC
[ENA]
¢þ
>WENV183087559
OLJL01000009
[OLJL] human gut metagenome; human gut
30203
30129
-
Met
CAT
[ENA]
¢þ
>WENV183087558
OLJL01000009
[OLJL] human gut metagenome; human gut
30297
30224
-
Thr
GGT
[ENA]
¢þ
>WENV183087557
OLJL01000009
[OLJL] human gut metagenome; human gut
30471
30388
-
Tyr
GTA
[ENA]
¢þ
>WENV183087550
OLJL01000002
[OLJL] human gut metagenome; human gut
37807
37891
+
Leu
CAG
[ENA]
¢þ
>WENV183087555
OLJL01000007
[OLJL] human gut metagenome; human gut
51299
51383
+
Leu
TAG
[ENA]
¢þ
>WENV183087562
OLJL01000010
[OLJL] human gut metagenome; human gut
52565
52479
-
Ser
CGA
[ENA]
¢þ
>WENV183087552
OLJL01000004
[OLJL] human gut metagenome; human gut
52815
52888
+
Gly
CCC
[ENA]
¢þ
>WENV183087556
OLJL01000007
[OLJL] human gut metagenome; human gut
53181
53108
-
Lys
CTT
[ENA]
¢þ
>WENV183087549
OLJL01000001
[OLJL] human gut metagenome; human gut
54501
54427
-
Ala
TGC
[ENA]
¢þ
>WENV183087548
OLJL01000001
[OLJL] human gut metagenome; human gut
54603
54529
-
Ile
GAT
[ENA]
¢þ
>WENV183087547
OLJL01000001
[OLJL] human gut metagenome; human gut
115482
115556
+
Pro
CGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK