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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OLUW] human gut metagenome; faeces
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183309381
OLUW01000750
[OLUW] human gut metagenome; faeces
45
119
+
Asn
GTT
[ENA]
¢þ
>WENV183309386
OLUW01001583
[OLUW] human gut metagenome; faeces
54
127
+
Lys
CTT
[ENA]
¢þ
>WENV183309378
OLUW01000274
[OLUW] human gut metagenome; faeces
116
42
-
Thr
TGT
[ENA]
¢þ
>WENV183309379
OLUW01000485
[OLUW] human gut metagenome; faeces
143
55
-
Ser
GGA
[ENA]
¢þ
>WENV183309385
OLUW01001516
[OLUW] human gut metagenome; faeces
269
344
+
His
GTG
[ENA]
¢þ
>WENV183309387
OLUW01001648
[OLUW] human gut metagenome; faeces
351
425
+
Pro
GGG
[ENA]
¢þ
>WENV183309383
OLUW01001230
[OLUW] human gut metagenome; faeces
364
290
-
Ala
TGC
[ENA]
¢þ
>WENV183309384
OLUW01001505
[OLUW] human gut metagenome; faeces
388
460
+
Arg
CCT
[ENA]
¢þ
>WENV183309382
OLUW01001230
[OLUW] human gut metagenome; faeces
453
379
-
Ile
GAT
[ENA]
¢þ
>WENV183309380
OLUW01000738
[OLUW] human gut metagenome; faeces
482
557
+
Val
TAC
[ENA]
¢þ
>WENV183309377
OLUW01000002
[OLUW] human gut metagenome; faeces
4965
4891
-
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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