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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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|
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HOW TO USE
tRNA gene List
[OLUZ] human gut metagenome; faeces
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183309497
OLUZ01002568
[OLUZ] human gut metagenome; faeces
1
74
+
Gly
CCC
[ENA]
¢þ
>WENV183309463
OLUZ01000096
[OLUZ] human gut metagenome; faeces
106
182
+
Pro
CGG
[ENA]
¢þ
>WENV183309500
OLUZ01004419
[OLUZ] human gut metagenome; faeces
114
41
-
Ala
CGC
[ENA]
¢þ
>WENV183309492
OLUZ01000898
[OLUZ] human gut metagenome; faeces
116
203
+
Ser
GCT
[ENA]
¢þ
>WENV183309481
OLUZ01000306
[OLUZ] human gut metagenome; faeces
160
84
-
Ile
GAT
[ENA]
¢þ
>WENV183309467
OLUZ01000123
[OLUZ] human gut metagenome; faeces
170
97
-
Ala
GGC
[ENA]
¢þ
>WENV183309495
OLUZ01001740
[OLUZ] human gut metagenome; faeces
232
315
+
Leu
CAG
[ENA]
¢þ
>WENV183309475
OLUZ01000155
[OLUZ] human gut metagenome; faeces
248
174
-
Cys
GCA
[ENA]
¢þ
>WENV183309480
OLUZ01000255
[OLUZ] human gut metagenome; faeces
295
223
-
Arg
CCT
[ENA]
¢þ
>WENV183309474
OLUZ01000155
[OLUZ] human gut metagenome; faeces
346
273
-
Gln
TTG
[ENA]
¢þ
>WENV183309473
OLUZ01000155
[OLUZ] human gut metagenome; faeces
467
391
-
His
GTG
[ENA]
¢þ
>WENV183309494
OLUZ01001267
[OLUZ] human gut metagenome; faeces
501
573
+
Glu
TTC
[ENA]
¢þ
>WENV183309499
OLUZ01003032
[OLUZ] human gut metagenome; faeces
506
431
-
Gly
GCC
[ENA]
¢þ
>WENV183309498
OLUZ01002773
[OLUZ] human gut metagenome; faeces
567
640
+
Lys
TTT
[ENA]
¢þ
>WENV183309472
OLUZ01000155
[OLUZ] human gut metagenome; faeces
596
520
-
Arg
TCT
[ENA]
¢þ
>WENV183309482
OLUZ01000492
[OLUZ] human gut metagenome; faeces
607
532
-
Lys
CTT
[ENA]
¢þ
>WENV183309484
OLUZ01000578
[OLUZ] human gut metagenome; faeces
622
697
+
Lys
CTT
[ENA]
¢þ
>WENV183309496
OLUZ01002271
[OLUZ] human gut metagenome; faeces
656
581
-
Ala
TGC
[ENA]
¢þ
>WENV183309490
OLUZ01000757
[OLUZ] human gut metagenome; faeces
685
613
-
Thr
CGT
[ENA]
¢þ
>WENV183309471
OLUZ01000155
[OLUZ] human gut metagenome; faeces
703
630
-
Gly
TCC
[ENA]
¢þ
>WENV183309485
OLUZ01000578
[OLUZ] human gut metagenome; faeces
748
822
+
Glu
CTC
[ENA]
¢þ
>WENV183309489
OLUZ01000757
[OLUZ] human gut metagenome; faeces
768
694
-
Glu
TTC
[ENA]
¢þ
>WENV183309493
OLUZ01001234
[OLUZ] human gut metagenome; faeces
845
771
-
Met
CAT
[ENA]
¢þ
>WENV183309470
OLUZ01000155
[OLUZ] human gut metagenome; faeces
862
786
-
Asp
GTC
[ENA]
¢þ
>WENV183309488
OLUZ01000757
[OLUZ] human gut metagenome; faeces
863
774
-
Ser
GCT
[ENA]
¢þ
>WENV183309491
OLUZ01000827
[OLUZ] human gut metagenome; faeces
892
967
+
Pro
TGG
[ENA]
¢þ
>WENV183309465
OLUZ01000101
[OLUZ] human gut metagenome; faeces
904
831
-
fMet
CAT
[ENA]
¢þ
>WENV183309487
OLUZ01000757
[OLUZ] human gut metagenome; faeces
940
864
-
Ile
GAT
[ENA]
¢þ
>WENV183309464
OLUZ01000101
[OLUZ] human gut metagenome; faeces
1010
924
-
Leu
CAA
[ENA]
¢þ
>WENV183309469
OLUZ01000155
[OLUZ] human gut metagenome; faeces
1022
947
-
Gly
GCC
[ENA]
¢þ
>WENV183309486
OLUZ01000757
[OLUZ] human gut metagenome; faeces
1022
952
-
Gly
TCC
[ENA]
¢þ
>WENV183309483
OLUZ01000575
[OLUZ] human gut metagenome; faeces
1035
1110
+
Ala
CGC
[ENA]
¢þ
>WENV183309468
OLUZ01000155
[OLUZ] human gut metagenome; faeces
1101
1026
-
Phe
GAA
[ENA]
¢þ
>WENV183309476
OLUZ01000206
[OLUZ] human gut metagenome; faeces
1172
1243
+
Gly
GCC
[ENA]
¢þ
>WENV183309477
OLUZ01000206
[OLUZ] human gut metagenome; faeces
1272
1359
+
Leu
TAA
[ENA]
¢þ
>WENV183309478
OLUZ01000206
[OLUZ] human gut metagenome; faeces
1376
1449
+
Arg
ACG
[ENA]
¢þ
>WENV183309479
OLUZ01000206
[OLUZ] human gut metagenome; faeces
1454
1530
+
Pro
TGG
[ENA]
¢þ
>WENV183309466
OLUZ01000119
[OLUZ] human gut metagenome; faeces
1617
1529
-
Ser
CGA
[ENA]
¢þ
>WENV183309462
OLUZ01000028
[OLUZ] human gut metagenome; faeces
2550
2474
-
Ile
GAT
[ENA]
¢þ
>WENV183309461
OLUZ01000028
[OLUZ] human gut metagenome; faeces
2761
2686
-
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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