This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OLVB] human gut metagenome; faeces
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183309585
OLVB01000902
[OLVB] human gut metagenome; faeces
74
150
+
Arg
CCT
[ENA]
¢þ
>WENV183309571
OLVB01000036
[OLVB] human gut metagenome; faeces
91
166
+
Arg
CCT
[ENA]
¢þ
>WENV183309584
OLVB01000827
[OLVB] human gut metagenome; faeces
110
200
+
Leu
GAG
[ENA]
¢þ
>WENV183309580
OLVB01000375
[OLVB] human gut metagenome; faeces
142
55
-
Ser
TGA
[ENA]
¢þ
>WENV183309578
OLVB01000261
[OLVB] human gut metagenome; faeces
147
72
-
Ile2
CAT
[ENA]
¢þ
>WENV183309577
OLVB01000261
[OLVB] human gut metagenome; faeces
223
151
-
Thr
TGT
[ENA]
¢þ
>WENV183309583
OLVB01000559
[OLVB] human gut metagenome; faeces
258
184
-
Phe
GAA
[ENA]
¢þ
>WENV183309576
OLVB01000261
[OLVB] human gut metagenome; faeces
344
271
-
Glu
TTC
[ENA]
¢þ
>WENV183309582
OLVB01000559
[OLVB] human gut metagenome; faeces
351
277
-
fMet
CAT
[ENA]
¢þ
>WENV183309579
OLVB01000322
[OLVB] human gut metagenome; faeces
393
465
+
Trp
CCA
[ENA]
¢þ
>WENV183309575
OLVB01000261
[OLVB] human gut metagenome; faeces
421
347
-
Asn
GTT
[ENA]
¢þ
>WENV183309572
OLVB01000149
[OLVB] human gut metagenome; faeces
434
509
+
Arg
CCT
[ENA]
¢þ
>WENV183309581
OLVB01000502
[OLVB] human gut metagenome; faeces
615
541
-
Ala
GGC
[ENA]
¢þ
>WENV183309574
OLVB01000199
[OLVB] human gut metagenome; faeces
798
707
-
Ser
GGA
[ENA]
¢þ
>WENV183309573
OLVB01000199
[OLVB] human gut metagenome; faeces
889
802
-
Ser
TGA
[ENA]
¢þ
>WENV183309570
OLVB01000006
[OLVB] human gut metagenome; faeces
1165
1091
-
Glu
TTC
[ENA]
¢þ
>WENV183309569
OLVB01000001
[OLVB] human gut metagenome; faeces
20286
20358
+
Cys
GCA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK