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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
[OLVQ] human gut metagenome; faeces
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183313429
OLVQ01000095
[OLVQ] human gut metagenome; faeces
118
29
-
Ser
GGA
[ENA]
¢þ
>WENV183313431
OLVQ01000099
[OLVQ] human gut metagenome; faeces
125
51
-
His
GTG
[ENA]
¢þ
>WENV183313437
OLVQ01000362
[OLVQ] human gut metagenome; faeces
155
82
-
Ile2
CAT
[ENA]
¢þ
>WENV183313430
OLVQ01000099
[OLVQ] human gut metagenome; faeces
205
130
-
Arg
TCT
[ENA]
¢þ
>WENV183313428
OLVQ01000095
[OLVQ] human gut metagenome; faeces
221
135
-
Ser
TGA
[ENA]
¢þ
>WENV183313436
OLVQ01000362
[OLVQ] human gut metagenome; faeces
268
196
-
Thr
TGT
[ENA]
¢þ
>WENV183313435
OLVQ01000362
[OLVQ] human gut metagenome; faeces
357
275
-
Tyr
GTA
[ENA]
¢þ
>WENV183313432
OLVQ01000159
[OLVQ] human gut metagenome; faeces
367
440
+
Ile
GAT
[ENA]
¢þ
>WENV183313440
OLVQ01000547
[OLVQ] human gut metagenome; faeces
402
475
+
Asn
GTT
[ENA]
¢þ
>WENV183313439
OLVQ01000485
[OLVQ] human gut metagenome; faeces
426
339
-
Leu
TAA
[ENA]
¢þ
>WENV183313438
OLVQ01000375
[OLVQ] human gut metagenome; faeces
434
508
+
Asn
GTT
[ENA]
¢þ
>WENV183313434
OLVQ01000362
[OLVQ] human gut metagenome; faeces
436
362
-
Val
TAC
[ENA]
¢þ
>WENV183313433
OLVQ01000362
[OLVQ] human gut metagenome; faeces
547
472
-
Asp
GTC
[ENA]
¢þ
>WENV183313427
OLVQ01000019
[OLVQ] human gut metagenome; faeces
1855
1767
-
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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