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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
[OLZP] human gut metagenome; feces
HIT:
161 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183398697
OLZP01000055
[OLZP] human gut metagenome; feces
2
76
+
Ile2
CAT
[ENA]
¢þ
>WENV183398838
OLZP01013292
[OLZP] human gut metagenome; feces
34
118
+
Leu
TAA
[ENA]
¢þ
>WENV183398834
OLZP01012196
[OLZP] human gut metagenome; feces
45
121
+
Arg
CCT
[ENA]
¢þ
>WENV183398845
OLZP01014821
[OLZP] human gut metagenome; feces
64
153
+
Leu
GAG
[ENA]
¢þ
>WENV183398776
OLZP01003747
[OLZP] human gut metagenome; feces
66
138
+
Thr
GGT
[ENA]
¢þ
>WENV183398738
OLZP01000889
[OLZP] human gut metagenome; feces
68
142
+
fMet
CAT
[ENA]
¢þ
>WENV183398847
OLZP01015248
[OLZP] human gut metagenome; feces
74
-1
-
Phe
GAA
[ENA]
¢þ
>WENV183398764
OLZP01002271
[OLZP] human gut metagenome; feces
75
1
-
Ala
TGC
[ENA]
¢þ
>WENV183398756
OLZP01002057
[OLZP] human gut metagenome; feces
76
2
-
Lys
TTT
[ENA]
¢þ
>WENV183398748
OLZP01001506
[OLZP] human gut metagenome; feces
80
154
+
Asn
GTT
[ENA]
¢þ
>WENV183398688
OLZP01000005
[OLZP] human gut metagenome; feces
87
3
-
Leu
CAA
[ENA]
¢þ
>WENV183398836
OLZP01013001
[OLZP] human gut metagenome; feces
88
163
+
Ala
CGC
[ENA]
¢þ
>WENV183398814
OLZP01009177
[OLZP] human gut metagenome; feces
110
185
+
Val
TAC
[ENA]
¢þ
>WENV183398835
OLZP01012839
[OLZP] human gut metagenome; feces
114
40
-
Lys
CTT
[ENA]
¢þ
>WENV183398757
OLZP01002094
[OLZP] human gut metagenome; feces
115
203
+
Leu
TAA
[ENA]
¢þ
>WENV183398848
OLZP01015269
[OLZP] human gut metagenome; feces
116
203
+
Ser
CGA
[ENA]
¢þ
>WENV183398827
OLZP01010637
[OLZP] human gut metagenome; feces
119
191
+
Pro
TGG
[ENA]
¢þ
>WENV183398846
OLZP01015073
[OLZP] human gut metagenome; feces
120
193
+
Lys
CTT
[ENA]
¢þ
>WENV183398798
OLZP01006827
[OLZP] human gut metagenome; feces
122
34
-
Ser
GGA
[ENA]
¢þ
>WENV183398842
OLZP01014093
[OLZP] human gut metagenome; feces
141
68
-
Gly
TCC
[ENA]
¢þ
>WENV183398768
OLZP01002709
[OLZP] human gut metagenome; feces
149
77
-
Gln
CTG
[ENA]
¢þ
>WENV183398824
OLZP01009698
[OLZP] human gut metagenome; feces
165
91
-
Lys
TTT
[ENA]
¢þ
>WENV183398763
OLZP01002271
[OLZP] human gut metagenome; feces
166
92
-
Ile
GAT
[ENA]
¢þ
>WENV183398830
OLZP01011020
[OLZP] human gut metagenome; feces
180
87
-
Ser
GCT
[ENA]
¢þ
>WENV183398837
OLZP01013190
[OLZP] human gut metagenome; feces
180
255
+
Asn
GTT
[ENA]
¢þ
>WENV183398770
OLZP01002980
[OLZP] human gut metagenome; feces
186
102
-
Leu
CAA
[ENA]
¢þ
>WENV183398719
OLZP01000428
[OLZP] human gut metagenome; feces
187
113
-
Met
CAT
[ENA]
¢þ
>WENV183398762
OLZP01002228
[OLZP] human gut metagenome; feces
189
95
-
Ser
GCT
[ENA]
¢þ
>WENV183398815
OLZP01009177
[OLZP] human gut metagenome; feces
193
268
+
Thr
TGT
[ENA]
¢þ
>WENV183398811
OLZP01008320
[OLZP] human gut metagenome; feces
200
123
-
Arg
ACG
[ENA]
¢þ
>WENV183398844
OLZP01014259
[OLZP] human gut metagenome; feces
206
118
-
Ser
GCT
[ENA]
¢þ
>WENV183398754
OLZP01001638
[OLZP] human gut metagenome; feces
218
143
-
Thr
GGT
[ENA]
¢þ
>WENV183398795
OLZP01006411
[OLZP] human gut metagenome; feces
227
153
-
Gln
TTG
[ENA]
¢þ
>WENV183398733
OLZP01000702
[OLZP] human gut metagenome; feces
228
155
-
Gly
CCC
[ENA]
¢þ
>WENV183398831
OLZP01011095
[OLZP] human gut metagenome; feces
230
158
-
Arg
CCT
[ENA]
¢þ
>WENV183398841
OLZP01014093
[OLZP] human gut metagenome; feces
233
147
-
Leu
CAA
[ENA]
¢þ
>WENV183398825
OLZP01009855
[OLZP] human gut metagenome; feces
235
161
-
Thr
TGT
[ENA]
¢þ
>WENV183398823
OLZP01009698
[OLZP] human gut metagenome; feces
258
186
-
Gln
TTG
[ENA]
¢þ
>WENV183398816
OLZP01009177
[OLZP] human gut metagenome; feces
274
349
+
Lys
TTT
[ENA]
¢þ
>WENV183398736
OLZP01000831
[OLZP] human gut metagenome; feces
287
362
+
Ala
TGC
[ENA]
¢þ
>WENV183398829
OLZP01011020
[OLZP] human gut metagenome; feces
300
213
-
Ser
TGA
[ENA]
¢þ
>WENV183398826
OLZP01010122
[OLZP] human gut metagenome; feces
308
235
-
Thr
CGT
[ENA]
¢þ
>WENV183398730
OLZP01000589
[OLZP] human gut metagenome; feces
315
394
+
Leu
CAA
[ENA]
¢þ
>WENV183398767
OLZP01002709
[OLZP] human gut metagenome; feces
315
406
+
Ser
GGA
[ENA]
¢þ
>WENV183398810
OLZP01008320
[OLZP] human gut metagenome; feces
318
233
-
Leu
TAA
[ENA]
¢þ
>WENV183398839
OLZP01013404
[OLZP] human gut metagenome; feces
321
394
+
Lys
TTT
[ENA]
¢þ
>WENV183398843
OLZP01014100
[OLZP] human gut metagenome; feces
324
253
-
Gln
CTG
[ENA]
¢þ
>WENV183398781
OLZP01003882
[OLZP] human gut metagenome; feces
325
252
-
Gly
CCC
[ENA]
¢þ
>WENV183398812
OLZP01008401
[OLZP] human gut metagenome; feces
326
401
+
Trp
CCA
[ENA]
¢þ
>WENV183398833
OLZP01011341
[OLZP] human gut metagenome; feces
337
249
-
Ser
GGA
[ENA]
¢þ
>WENV183398822
OLZP01009698
[OLZP] human gut metagenome; feces
341
266
-
His
GTG
[ENA]
¢þ
>WENV183398840
OLZP01014066
[OLZP] human gut metagenome; feces
343
270
-
Thr
CGT
[ENA]
¢þ
>WENV183398783
OLZP01004257
[OLZP] human gut metagenome; feces
344
418
+
Arg
ACG
[ENA]
¢þ
>WENV183398807
OLZP01008282
[OLZP] human gut metagenome; feces
349
274
-
Gln
CTG
[ENA]
¢þ
>WENV183398817
OLZP01009177
[OLZP] human gut metagenome; feces
359
432
+
Gly
TCC
[ENA]
¢þ
>WENV183398753
OLZP01001615
[OLZP] human gut metagenome; feces
366
279
-
Leu
TAA
[ENA]
¢þ
>WENV183398737
OLZP01000831
[OLZP] human gut metagenome; feces
366
442
+
Ile
GAT
[ENA]
¢þ
>WENV183398784
OLZP01005001
[OLZP] human gut metagenome; feces
386
462
+
Ile
GAT
[ENA]
¢þ
>WENV183398828
OLZP01010702
[OLZP] human gut metagenome; feces
406
331
-
Glu
TTC
[ENA]
¢þ
>WENV183398741
OLZP01001001
[OLZP] human gut metagenome; feces
406
481
+
Pro
TGG
[ENA]
¢þ
>WENV183398793
OLZP01005848
[OLZP] human gut metagenome; feces
407
334
-
Pro
GGG
[ENA]
¢þ
>WENV183398800
OLZP01007013
[OLZP] human gut metagenome; feces
418
504
+
Leu
CAA
[ENA]
¢þ
>WENV183398766
OLZP01002606
[OLZP] human gut metagenome; feces
419
502
+
Leu
TAA
[ENA]
¢þ
>WENV183398821
OLZP01009698
[OLZP] human gut metagenome; feces
442
366
-
Arg
TCT
[ENA]
¢þ
>WENV183398778
OLZP01003778
[OLZP] human gut metagenome; feces
468
544
+
Arg
CCT
[ENA]
¢þ
>WENV183398769
OLZP01002857
[OLZP] human gut metagenome; feces
470
546
+
Arg
CCG
[ENA]
¢þ
>WENV183398734
OLZP01000708
[OLZP] human gut metagenome; feces
475
563
+
Ser
GGA
[ENA]
¢þ
>WENV183398818
OLZP01009177
[OLZP] human gut metagenome; feces
477
560
+
Tyr
GTA
[ENA]
¢þ
>WENV183398809
OLZP01008320
[OLZP] human gut metagenome; feces
484
401
-
Tyr
GTA
[ENA]
¢þ
>WENV183398806
OLZP01008006
[OLZP] human gut metagenome; feces
485
394
-
Ser
CGA
[ENA]
¢þ
>WENV183398832
OLZP01011119
[OLZP] human gut metagenome; feces
491
418
-
Asn
GTT
[ENA]
¢þ
>WENV183398735
OLZP01000788
[OLZP] human gut metagenome; feces
498
569
+
Gln
TTG
[ENA]
¢þ
>WENV183398803
OLZP01007345
[OLZP] human gut metagenome; feces
504
577
+
Gly
GCC
[ENA]
¢þ
>WENV183398771
OLZP01003185
[OLZP] human gut metagenome; feces
504
577
+
Gln
CTG
[ENA]
¢þ
>WENV183398796
OLZP01006493
[OLZP] human gut metagenome; feces
511
585
+
His
GTG
[ENA]
¢þ
>WENV183398820
OLZP01009698
[OLZP] human gut metagenome; feces
515
445
-
Gly
TCC
[ENA]
¢þ
>WENV183398813
OLZP01008787
[OLZP] human gut metagenome; feces
530
604
+
Gly
TCC
[ENA]
¢þ
>WENV183398788
OLZP01005517
[OLZP] human gut metagenome; feces
557
631
+
Pro
TGG
[ENA]
¢þ
>WENV183398785
OLZP01005001
[OLZP] human gut metagenome; feces
566
658
+
Ser
TGA
[ENA]
¢þ
>WENV183398802
OLZP01007216
[OLZP] human gut metagenome; feces
577
652
+
His
GTG
[ENA]
¢þ
>WENV183398819
OLZP01009698
[OLZP] human gut metagenome; feces
596
520
-
Pro
TGG
[ENA]
¢þ
>WENV183398774
OLZP01003619
[OLZP] human gut metagenome; feces
601
684
+
Leu
TAG
[ENA]
¢þ
>WENV183398790
OLZP01005568
[OLZP] human gut metagenome; feces
606
530
-
Val
CAC
[ENA]
¢þ
>WENV183398804
OLZP01007345
[OLZP] human gut metagenome; feces
607
680
+
Cys
GCA
[ENA]
¢þ
>WENV183398808
OLZP01008320
[OLZP] human gut metagenome; feces
614
540
-
Thr
TGT
[ENA]
¢þ
>WENV183398731
OLZP01000605
[OLZP] human gut metagenome; feces
628
713
+
Tyr
GTA
[ENA]
¢þ
>WENV183398789
OLZP01005517
[OLZP] human gut metagenome; feces
645
718
+
Gly
GCC
[ENA]
¢þ
>WENV183398799
OLZP01006927
[OLZP] human gut metagenome; feces
663
754
+
Ser
GGA
[ENA]
¢þ
>WENV183398805
OLZP01007755
[OLZP] human gut metagenome; feces
665
589
-
Arg
TCT
[ENA]
¢þ
>WENV183398801
OLZP01007142
[OLZP] human gut metagenome; feces
666
592
-
Thr
TGT
[ENA]
¢þ
>WENV183398779
OLZP01003859
[OLZP] human gut metagenome; feces
679
753
+
Glu
CTC
[ENA]
¢þ
>WENV183398777
OLZP01003768
[OLZP] human gut metagenome; feces
683
755
+
Arg
CCG
[ENA]
¢þ
>WENV183398792
OLZP01005705
[OLZP] human gut metagenome; feces
687
616
-
Cys
GCA
[ENA]
¢þ
>WENV183398797
OLZP01006549
[OLZP] human gut metagenome; feces
698
617
-
Leu
TAG
[ENA]
¢þ
>WENV183398772
OLZP01003362
[OLZP] human gut metagenome; feces
704
779
+
Trp
CCA
[ENA]
¢þ
>WENV183398787
OLZP01005245
[OLZP] human gut metagenome; feces
736
662
-
Glu
CTC
[ENA]
¢þ
>WENV183398780
OLZP01003859
[OLZP] human gut metagenome; feces
757
832
+
Lys
CTT
[ENA]
¢þ
>WENV183398786
OLZP01005001
[OLZP] human gut metagenome; feces
760
836
+
Asp
GTC
[ENA]
¢þ
>WENV183398791
OLZP01005705
[OLZP] human gut metagenome; feces
770
698
-
Asn
GTT
[ENA]
¢þ
>WENV183398794
OLZP01006238
[OLZP] human gut metagenome; feces
786
711
-
Lys
TTT
[ENA]
¢þ
>WENV183398752
OLZP01001615
[OLZP] human gut metagenome; feces
819
746
-
Thr
TGT
[ENA]
¢þ
>WENV183398747
OLZP01001320
[OLZP] human gut metagenome; feces
863
936
+
Trp
CCA
[ENA]
¢þ
>WENV183398726
OLZP01000496
[OLZP] human gut metagenome; feces
904
822
-
Tyr
GTA
[ENA]
¢þ
>WENV183398782
OLZP01004097
[OLZP] human gut metagenome; feces
916
990
+
Val
GAC
[ENA]
¢þ
>WENV183398750
OLZP01001612
[OLZP] human gut metagenome; feces
932
861
-
Glu
TTC
[ENA]
¢þ
>WENV183398775
OLZP01003644
[OLZP] human gut metagenome; feces
943
868
-
Arg
CCT
[ENA]
¢þ
>WENV183398755
OLZP01001867
[OLZP] human gut metagenome; feces
954
881
-
Trp
CCA
[ENA]
¢þ
>WENV183398773
OLZP01003362
[OLZP] human gut metagenome; feces
956
1032
+
Asp
GTC
[ENA]
¢þ
>WENV183398712
OLZP01000159
[OLZP] human gut metagenome; feces
1006
921
-
Ser
TGA
[ENA]
¢þ
>WENV183398751
OLZP01001615
[OLZP] human gut metagenome; feces
1009
938
-
Gln
TTG
[ENA]
¢þ
>WENV183398761
OLZP01002216
[OLZP] human gut metagenome; feces
1014
928
-
Ser
CGA
[ENA]
¢þ
>WENV183398740
OLZP01000942
[OLZP] human gut metagenome; feces
1017
1103
+
Leu
CAG
[ENA]
¢þ
>WENV183398759
OLZP01002185
[OLZP] human gut metagenome; feces
1049
1122
+
Glu
CTC
[ENA]
¢þ
>WENV183398749
OLZP01001612
[OLZP] human gut metagenome; feces
1100
1024
-
Met
CAT
[ENA]
¢þ
>WENV183398725
OLZP01000496
[OLZP] human gut metagenome; feces
1140
1068
-
Glu
TTC
[ENA]
¢þ
>WENV183398760
OLZP01002185
[OLZP] human gut metagenome; feces
1160
1234
+
Gln
CTG
[ENA]
¢þ
>WENV183398710
OLZP01000145
[OLZP] human gut metagenome; feces
1170
1242
+
Glu
TTC
[ENA]
¢þ
>WENV183398743
OLZP01001068
[OLZP] human gut metagenome; feces
1188
1260
+
Arg
CCT
[ENA]
¢þ
>WENV183398744
OLZP01001139
[OLZP] human gut metagenome; feces
1205
1132
-
fMet
CAT
[ENA]
¢þ
>WENV183398724
OLZP01000496
[OLZP] human gut metagenome; feces
1216
1145
-
Gln
TTG
[ENA]
¢þ
>WENV183398765
OLZP01002346
[OLZP] human gut metagenome; feces
1230
1156
-
Ile2
CAT
[ENA]
¢þ
>WENV183398723
OLZP01000496
[OLZP] human gut metagenome; feces
1294
1221
-
Trp
CCA
[ENA]
¢þ
>WENV183398758
OLZP01002114
[OLZP] human gut metagenome; feces
1309
1236
-
Ala
CGC
[ENA]
¢þ
>WENV183398739
OLZP01000894
[OLZP] human gut metagenome; feces
1309
1394
+
Ser
TGA
[ENA]
¢þ
>WENV183398722
OLZP01000496
[OLZP] human gut metagenome; feces
1374
1301
-
Asn
GTT
[ENA]
¢þ
>WENV183398745
OLZP01001214
[OLZP] human gut metagenome; feces
1420
1346
-
Lys
TTT
[ENA]
¢þ
>WENV183398746
OLZP01001246
[OLZP] human gut metagenome; feces
1485
1411
-
Ala
GGC
[ENA]
¢þ
>WENV183398742
OLZP01001009
[OLZP] human gut metagenome; feces
1605
1532
-
Val
GAC
[ENA]
¢þ
>WENV183398721
OLZP01000496
[OLZP] human gut metagenome; feces
1664
1591
-
fMet
CAT
[ENA]
¢þ
>WENV183398717
OLZP01000231
[OLZP] human gut metagenome; feces
1731
1658
-
Lys
CTT
[ENA]
¢þ
>WENV183398732
OLZP01000632
[OLZP] human gut metagenome; feces
1825
1750
-
fMet
CAT
[ENA]
¢þ
>WENV183398718
OLZP01000254
[OLZP] human gut metagenome; feces
2184
2109
-
His
GTG
[ENA]
¢þ
>WENV183398729
OLZP01000583
[OLZP] human gut metagenome; feces
2327
2253
-
Ala
TGC
[ENA]
¢þ
>WENV183398728
OLZP01000583
[OLZP] human gut metagenome; feces
2437
2362
-
Ile
GAT
[ENA]
¢þ
>WENV183398727
OLZP01000530
[OLZP] human gut metagenome; feces
3170
3253
+
Tyr
GTA
[ENA]
¢þ
>WENV183398705
OLZP01000126
[OLZP] human gut metagenome; feces
3190
3116
-
Glu
CTC
[ENA]
¢þ
>WENV183398720
OLZP01000463
[OLZP] human gut metagenome; feces
3576
3500
-
Asn
GTT
[ENA]
¢þ
>WENV183398704
OLZP01000126
[OLZP] human gut metagenome; feces
3631
3544
-
Ser
GCT
[ENA]
¢þ
>WENV183398714
OLZP01000183
[OLZP] human gut metagenome; feces
4292
4218
-
Thr
TGT
[ENA]
¢þ
>WENV183398703
OLZP01000126
[OLZP] human gut metagenome; feces
4385
4311
-
Cys
GCA
[ENA]
¢þ
>WENV183398689
OLZP01000006
[OLZP] human gut metagenome; feces
5075
5147
+
Arg
CCT
[ENA]
¢þ
>WENV183398707
OLZP01000128
[OLZP] human gut metagenome; feces
5733
5659
-
Asp
GTC
[ENA]
¢þ
>WENV183398706
OLZP01000127
[OLZP] human gut metagenome; feces
6070
6144
+
Ala
GGC
[ENA]
¢þ
>WENV183398713
OLZP01000177
[OLZP] human gut metagenome; feces
6486
6568
+
Leu
TAG
[ENA]
¢þ
>WENV183398716
OLZP01000201
[OLZP] human gut metagenome; feces
7531
7602
+
Gln
CTG
[ENA]
¢þ
>WENV183398715
OLZP01000194
[OLZP] human gut metagenome; feces
7992
7918
-
Asp
GTC
[ENA]
¢þ
>WENV183398699
OLZP01000067
[OLZP] human gut metagenome; feces
8136
8060
-
Val
TAC
[ENA]
¢þ
>WENV183398700
OLZP01000078
[OLZP] human gut metagenome; feces
8240
8328
+
Ser
GGA
[ENA]
¢þ
>WENV183398696
OLZP01000034
[OLZP] human gut metagenome; feces
8518
8430
-
Ser
GGA
[ENA]
¢þ
>WENV183398711
OLZP01000156
[OLZP] human gut metagenome; feces
9078
9152
+
Asn
GTT
[ENA]
¢þ
>WENV183398708
OLZP01000132
[OLZP] human gut metagenome; feces
9607
9681
+
Arg
TCT
[ENA]
¢þ
>WENV183398709
OLZP01000132
[OLZP] human gut metagenome; feces
9706
9780
+
Arg
TCT
[ENA]
¢þ
>WENV183398702
OLZP01000123
[OLZP] human gut metagenome; feces
10662
10735
+
fMet
CAT
[ENA]
¢þ
>WENV183398701
OLZP01000097
[OLZP] human gut metagenome; feces
11105
11033
-
Arg
CCG
[ENA]
¢þ
>WENV183398698
OLZP01000062
[OLZP] human gut metagenome; feces
13333
13408
+
Pro
GGG
[ENA]
¢þ
>WENV183398695
OLZP01000021
[OLZP] human gut metagenome; feces
20682
20609
-
Pro
CGG
[ENA]
¢þ
>WENV183398694
OLZP01000021
[OLZP] human gut metagenome; feces
20769
20696
-
Phe
GAA
[ENA]
¢þ
>WENV183398691
OLZP01000012
[OLZP] human gut metagenome; feces
21127
21042
-
Ser
TGA
[ENA]
¢þ
>WENV183398693
OLZP01000019
[OLZP] human gut metagenome; feces
24972
24901
-
Gln
TTG
[ENA]
¢þ
>WENV183398692
OLZP01000016
[OLZP] human gut metagenome; feces
34655
34728
+
Gly
GCC
[ENA]
¢þ
>WENV183398690
OLZP01000012
[OLZP] human gut metagenome; feces
34748
34821
+
Trp
CCA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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