Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA gene List

[OOFL] marine metagenome; seawater

HIT: 159 sequence(s).

Download Sequence
View ClustalW result

The reliable tRNA genes	All candidate tRNA genes

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
	>WENV183618018	OOFL01002875	[OOFL] marine metagenome; seawater		6	80	+	Thr	TGT	[ENA]	◯
	>WENV183618072	OOFL01014470	[OOFL] marine metagenome; seawater		12	85	+	Trp	CCA	[ENA]	◯
	>WENV183618046	OOFL01009183	[OOFL] marine metagenome; seawater		13	84	+	Gln	TTG	[ENA]	◯
	>WENV183617996	OOFL01001105	[OOFL] marine metagenome; seawater		16	90	+	His	GTG	[ENA]	◯
	>WENV183617995	OOFL01001065	[OOFL] marine metagenome; seawater		17	91	+	Trp	CCA	[ENA]	◯
	>WENV183618091	OOFL01021075	[OOFL] marine metagenome; seawater		33	107	+	Val	TAC	[ENA]	◯
	>WENV183618063	OOFL01012795	[OOFL] marine metagenome; seawater		36	109	+	His	GTG	[ENA]	◯
	>WENV183618083	OOFL01018480	[OOFL] marine metagenome; seawater		38	113	+	Arg	TCT	[ENA]	◯
	>WENV183618032	OOFL01005722	[OOFL] marine metagenome; seawater		41	113	+	Gly	TCC	[ENA]	◯
	>WENV183618064	OOFL01013218	[OOFL] marine metagenome; seawater		54	127	+	Val	CAC	[ENA]	◯
	>WENV183618009	OOFL01002252	[OOFL] marine metagenome; seawater		66	142	+	Arg	CCG	[ENA]	◯
	>WENV183618031	OOFL01005631	[OOFL] marine metagenome; seawater		75	1	-	Asp	GTC	[ENA]	◯
	>WENV183618014	OOFL01002661	[OOFL] marine metagenome; seawater		93	165	+	Trp	CCA	[ENA]	◯
	>WENV183618023	OOFL01003755	[OOFL] marine metagenome; seawater		98	182	+	Leu	CAA	[ENA]	◯
	>WENV183618069	OOFL01014216	[OOFL] marine metagenome; seawater		102	29	-	Ile	GAT	[ENA]	◯
	>WENV183618057	OOFL01010622	[OOFL] marine metagenome; seawater		109	185	+	Met	CAT	[ENA]	◯
	>WENV183617994	OOFL01001030	[OOFL] marine metagenome; seawater		115	42	-	Ile	GAT	[ENA]	◯
	>WENV183618078	OOFL01017217	[OOFL] marine metagenome; seawater		131	218	+	Ser	GCT	[ENA]	◯
	>WENV183618090	OOFL01020576	[OOFL] marine metagenome; seawater		133	62	-	Glu	TTC	[ENA]	◯
	>WENV183617989	OOFL01001030	[OOFL] marine metagenome; seawater		133	204	+	Gly	TCC	[ENA]	◯
	>WENV183618002	OOFL01001786	[OOFL] marine metagenome; seawater		135	58	-	fMet	CAT	[ENA]	◯
	>WENV183618074	OOFL01014962	[OOFL] marine metagenome; seawater		137	211	+	Glu	TTC	[ENA]	◯
	>WENV183618040	OOFL01007608	[OOFL] marine metagenome; seawater		137	223	+	Ile2	CAT	[ENA]	◯
	>WENV183618088	OOFL01019873	[OOFL] marine metagenome; seawater		140	64	-	Asp	GTC	[ENA]	◯
	>WENV183618086	OOFL01019473	[OOFL] marine metagenome; seawater		146	229	+	Leu	GAG	[ENA]	◯
	>WENV183617977	OOFL01000427	[OOFL] marine metagenome; seawater		148	75	-	Ile	TAT	[ENA]	◯
	>WENV183618084	OOFL01018731	[OOFL] marine metagenome; seawater		148	75	-	fMet	CAT	[ENA]	◯
	>WENV183617970	OOFL01000427	[OOFL] marine metagenome; seawater		159	237	+	Leu	AAG	[ENA]	◯
	>WENV183618070	OOFL01014237	[OOFL] marine metagenome; seawater		161	235	+	Gly	GCC	[ENA]	◯
	>WENV183617983	OOFL01000735	[OOFL] marine metagenome; seawater		165	91	-	Lys	TTT	[ENA]	◯
	>WENV183617965	OOFL01000305	[OOFL] marine metagenome; seawater		174	104	-	Gly	CCC	[ENA]	◯
	>WENV183617951	OOFL01000255	[OOFL] marine metagenome; seawater		177	103	-	Ile	GAT	[ENA]	◯
	>WENV183617944	OOFL01000104	[OOFL] marine metagenome; seawater		180	255	+	Ala	TGC	[ENA]	◯
	>WENV183617997	OOFL01001141	[OOFL] marine metagenome; seawater		181	253	+	Phe	GAA	[ENA]	◯
	>WENV183618077	OOFL01015545	[OOFL] marine metagenome; seawater		182	107	-	Asn	GTT	[ENA]	◯
	>WENV183618085	OOFL01019445	[OOFL] marine metagenome; seawater		182	266	+	Tyr	GTA	[ENA]	◯
	>WENV183618079	OOFL01017420	[OOFL] marine metagenome; seawater		183	267	+	Leu	TAA	[ENA]	◯
	>WENV183617952	OOFL01000305	[OOFL] marine metagenome; seawater		187	260	+	Gln	TTG	[ENA]	◯
	>WENV183618089	OOFL01020104	[OOFL] marine metagenome; seawater		189	263	+	Asn	GTT	[ENA]	◯
	>WENV183618037	OOFL01007339	[OOFL] marine metagenome; seawater		194	265	+	Lys	TTT	[ENA]	◯
	>WENV183618030	OOFL01005631	[OOFL] marine metagenome; seawater		197	125	-	Gln	TTG	[ENA]	◯
	>WENV183618093	OOFL01021075	[OOFL] marine metagenome; seawater		220	144	-	Arg	ACG	[ENA]	◯
	>WENV183618049	OOFL01009567	[OOFL] marine metagenome; seawater		223	299	+	Arg	CCT	[ENA]	◯
	>WENV183618039	OOFL01007492	[OOFL] marine metagenome; seawater		223	306	+	Leu	GAG	[ENA]	◯
	>WENV183618047	OOFL01009352	[OOFL] marine metagenome; seawater		225	149	-	Met	CAT	[ENA]	◯
	>WENV183618036	OOFL01007079	[OOFL] marine metagenome; seawater		225	296	+	Gln	TTG	[ENA]	◯
	>WENV183618087	OOFL01019873	[OOFL] marine metagenome; seawater		230	155	-	Val	TAC	[ENA]	◯
	>WENV183618082	OOFL01018063	[OOFL] marine metagenome; seawater		241	312	+	Pro	AGG	[ENA]	◯
	>WENV183618060	OOFL01011497	[OOFL] marine metagenome; seawater		245	318	+	Gln	TTG	[ENA]	◯
	>WENV183618013	OOFL01002625	[OOFL] marine metagenome; seawater		253	339	+	Ile2	CAT	[ENA]	◯
	>WENV183617982	OOFL01000735	[OOFL] marine metagenome; seawater		256	175	-	Leu	TAG	[ENA]	◯
	>WENV183618035	OOFL01006614	[OOFL] marine metagenome; seawater		256	183	-	fMet	CAT	[ENA]	◯
	>WENV183618044	OOFL01009153	[OOFL] marine metagenome; seawater		259	184	-	Thr	GGT	[ENA]	◯
	>WENV183618051	OOFL01010356	[OOFL] marine metagenome; seawater		263	338	+	Gly	GCC	[ENA]	◯
	>WENV183618048	OOFL01009507	[OOFL] marine metagenome; seawater		266	191	-	Gln	TTG	[ENA]	◯
	>WENV183618058	OOFL01011311	[OOFL] marine metagenome; seawater		268	341	+	Thr	TGT	[ENA]	◯
	>WENV183618080	OOFL01017420	[OOFL] marine metagenome; seawater		271	342	+	Thr	AGT	[ENA]	◯
	>WENV183618000	OOFL01001679	[OOFL] marine metagenome; seawater		274	199	-	Asp	GTC	[ENA]	◯
	>WENV183618094	OOFL01021460	[OOFL] marine metagenome; seawater		277	204	-	Thr	CGT	[ENA]	◯
	>WENV183618041	OOFL01008798	[OOFL] marine metagenome; seawater		280	364	+	Leu	TAG	[ENA]	◯
	>WENV183618073	OOFL01014577	[OOFL] marine metagenome; seawater		283	365	+	Leu	TAA	[ENA]	◯
	>WENV183618024	OOFL01004072	[OOFL] marine metagenome; seawater		303	375	+	Gly	TCC	[ENA]	◯
	>WENV183618055	OOFL01010580	[OOFL] marine metagenome; seawater		309	385	+	Met	CAT	[ENA]	◯
	>WENV183618059	OOFL01011457	[OOFL] marine metagenome; seawater		318	244	-	Asn	GTT	[ENA]	◯
	>WENV183618076	OOFL01015333	[OOFL] marine metagenome; seawater		324	399	+	Leu	TAA	[ENA]	◯
	>WENV183618022	OOFL01003478	[OOFL] marine metagenome; seawater		329	404	+	Pro	TGG	[ENA]	◯
	>WENV183618054	OOFL01010522	[OOFL] marine metagenome; seawater		332	405	+	His	GTG	[ENA]	◯
	>WENV183617990	OOFL01001030	[OOFL] marine metagenome; seawater		333	411	+	Arg	TCT	[ENA]	◯
	>WENV183618034	OOFL01006174	[OOFL] marine metagenome; seawater		345	418	+	Thr	TGT	[ENA]	◯
	>WENV183618068	OOFL01013942	[OOFL] marine metagenome; seawater		348	272	-	Met	CAT	[ENA]	◯
	>WENV183617981	OOFL01000735	[OOFL] marine metagenome; seawater		354	281	-	Ile	GAT	[ENA]	◯
	>WENV183618061	OOFL01011638	[OOFL] marine metagenome; seawater		356	285	-	Trp	CCA	[ENA]	◯
	>WENV183618066	OOFL01013741	[OOFL] marine metagenome; seawater		367	439	+	Tyr	GTA	[ENA]	◯
	>WENV183617948	OOFL01000190	[OOFL] marine metagenome; seawater		368	294	-	Ala	TGC	[ENA]	◯
	>WENV183618092	OOFL01021075	[OOFL] marine metagenome; seawater		369	297	-	Lys	CTT	[ENA]	◯
	>WENV183618052	OOFL01010356	[OOFL] marine metagenome; seawater		369	442	+	Cys	GCA	[ENA]	◯
	>WENV183617998	OOFL01001351	[OOFL] marine metagenome; seawater		380	455	+	Val	TAC	[ENA]	◯
	>WENV183618015	OOFL01002661	[OOFL] marine metagenome; seawater		381	469	+	Ser	GCT	[ENA]	◯
	>WENV183618075	OOFL01014962	[OOFL] marine metagenome; seawater		384	312	-	Gln	CTG	[ENA]	◯
	>WENV183618021	OOFL01003207	[OOFL] marine metagenome; seawater		389	316	-	Gln	TTG	[ENA]	◯
	>WENV183618027	OOFL01004307	[OOFL] marine metagenome; seawater		395	465	+	Cys	GCA	[ENA]	◯
	>WENV183618043	OOFL01009153	[OOFL] marine metagenome; seawater		401	328	-	Gly	TCC	[ENA]	◯
	>WENV183618050	OOFL01009567	[OOFL] marine metagenome; seawater		405	482	+	His	GTG	[ENA]	◯
	>WENV183618033	OOFL01005744	[OOFL] marine metagenome; seawater		410	338	-	Arg	TCG	[ENA]	◯
	>WENV183617991	OOFL01001030	[OOFL] marine metagenome; seawater		410	483	+	Pro	TGG	[ENA]	◯
	>WENV183618026	OOFL01004147	[OOFL] marine metagenome; seawater		411	337	-	Thr	TGT	[ENA]	◯
	>WENV183618062	OOFL01012758	[OOFL] marine metagenome; seawater		425	510	+	Tyr	GTA	[ENA]	◯
	>WENV183617999	OOFL01001679	[OOFL] marine metagenome; seawater		433	346	-	Ser	GCT	[ENA]	◯
	>WENV183618045	OOFL01009166	[OOFL] marine metagenome; seawater		434	518	+	Leu	TAG	[ENA]	◯
	>WENV183618067	OOFL01013741	[OOFL] marine metagenome; seawater		442	514	+	Gln	TTG	[ENA]	◯
	>WENV183618011	OOFL01002417	[OOFL] marine metagenome; seawater		445	521	+	fMet	CAT	[ENA]	◯
	>WENV183618025	OOFL01004072	[OOFL] marine metagenome; seawater		449	521	+	His	GTG	[ENA]	◯
	>WENV183618065	OOFL01013679	[OOFL] marine metagenome; seawater		449	532	+	Leu	CAA	[ENA]	◯
	>WENV183618010	OOFL01002307	[OOFL] marine metagenome; seawater		453	529	+	fMet	CAT	[ENA]	◯
	>WENV183618056	OOFL01010580	[OOFL] marine metagenome; seawater		455	539	+	Leu	TAG	[ENA]	◯
	>WENV183618081	OOFL01017607	[OOFL] marine metagenome; seawater		456	385	-	Trp	CCA	[ENA]	◯
	>WENV183618012	OOFL01002598	[OOFL] marine metagenome; seawater		469	393	-	Pro	TGG	[ENA]	◯
	>WENV183617976	OOFL01000427	[OOFL] marine metagenome; seawater		475	393	-	Ser	AGA	[ENA]	◯
	>WENV183618053	OOFL01010356	[OOFL] marine metagenome; seawater		479	565	+	Leu	TAA	[ENA]	◯
	>WENV183618016	OOFL01002719	[OOFL] marine metagenome; seawater		489	571	+	Tyr	GTA	[ENA]	◯
	>WENV183617964	OOFL01000305	[OOFL] marine metagenome; seawater		493	411	-	Leu	CAG	[ENA]	◯
	>WENV183618071	OOFL01014465	[OOFL] marine metagenome; seawater		498	424	-	Gln	TTG	[ENA]	◯
	>WENV183617953	OOFL01000305	[OOFL] marine metagenome; seawater		512	588	+	Lys	TTT	[ENA]	◯
	>WENV183617947	OOFL01000190	[OOFL] marine metagenome; seawater		532	458	-	Ile	GAT	[ENA]	◯
	>WENV183618028	OOFL01004307	[OOFL] marine metagenome; seawater		534	619	+	Leu	TAA	[ENA]	◯
	>WENV183618029	OOFL01004910	[OOFL] marine metagenome; seawater		550	467	-	Met	CAT	[ENA]	◯
	>WENV183618042	OOFL01009153	[OOFL] marine metagenome; seawater		582	498	-	Tyr	GTA	[ENA]	◯
	>WENV183618005	OOFL01002125	[OOFL] marine metagenome; seawater		582	654	+	Val	TAC	[ENA]	◯
	>WENV183617975	OOFL01000427	[OOFL] marine metagenome; seawater		584	513	-	Pro	CGG	[ENA]	◯
	>WENV183618038	OOFL01007339	[OOFL] marine metagenome; seawater		613	538	-	Ala	GGC	[ENA]	◯
	>WENV183618020	OOFL01002954	[OOFL] marine metagenome; seawater		614	542	-	Thr	CGT	[ENA]	◯
	>WENV183617954	OOFL01000305	[OOFL] marine metagenome; seawater		616	691	+	Arg	TCT	[ENA]	◯
	>WENV183618001	OOFL01001698	[OOFL] marine metagenome; seawater		617	533	-	Ser	TGA	[ENA]	◯
	>WENV183618003	OOFL01001961	[OOFL] marine metagenome; seawater		617	690	+	Gln	TTG	[ENA]	◯
	>WENV183618019	OOFL01002954	[OOFL] marine metagenome; seawater		635	707	+	Cys	GCA	[ENA]	◯
	>WENV183618017	OOFL01002874	[OOFL] marine metagenome; seawater		674	590	-	Ser	TGA	[ENA]	◯
	>WENV183617940	OOFL01000050	[OOFL] marine metagenome; seawater		679	605	-	Arg	TCT	[ENA]	◯
	>WENV183617955	OOFL01000305	[OOFL] marine metagenome; seawater		709	783	+	Val	TAC	[ENA]	◯
	>WENV183617974	OOFL01000427	[OOFL] marine metagenome; seawater		710	628	-	Ser	CGA	[ENA]	◯
	>WENV183617992	OOFL01001030	[OOFL] marine metagenome; seawater		731	803	+	Cys	GCA	[ENA]	◯
	>WENV183618006	OOFL01002125	[OOFL] marine metagenome; seawater		731	805	+	Cys	GCA	[ENA]	◯
	>WENV183617985	OOFL01000736	[OOFL] marine metagenome; seawater		795	719	-	Pro	TGG	[ENA]	◯
	>WENV183618007	OOFL01002125	[OOFL] marine metagenome; seawater		806	881	+	fMet	CAT	[ENA]	◯
	>WENV183617956	OOFL01000305	[OOFL] marine metagenome; seawater		812	884	+	Thr	CGT	[ENA]	◯
	>WENV183618004	OOFL01002027	[OOFL] marine metagenome; seawater		832	759	-	Trp	CCA	[ENA]	◯
	>WENV183617978	OOFL01000501	[OOFL] marine metagenome; seawater		836	917	+	Leu	TAG	[ENA]	◯
	>WENV183618008	OOFL01002145	[OOFL] marine metagenome; seawater		863	789	-	Asp	GTC	[ENA]	◯
	>WENV183617980	OOFL01000735	[OOFL] marine metagenome; seawater		869	798	-	Asn	GTT	[ENA]	◯
	>WENV183617971	OOFL01000427	[OOFL] marine metagenome; seawater		889	972	+	Ser	AGA	[ENA]	◯
	>WENV183617943	OOFL01000102	[OOFL] marine metagenome; seawater		911	838	-	Ile	TAT	[ENA]	◯
	>WENV183617939	OOFL01000050	[OOFL] marine metagenome; seawater		918	847	-	Val	TAC	[ENA]	◯
	>WENV183617957	OOFL01000305	[OOFL] marine metagenome; seawater		946	1027	+	Ser	GCT	[ENA]	◯
	>WENV183617968	OOFL01000399	[OOFL] marine metagenome; seawater		986	913	-	Arg	ACG	[ENA]	◯
	>WENV183617988	OOFL01000960	[OOFL] marine metagenome; seawater		1017	942	-	Ala	TGC	[ENA]	◯
	>WENV183617967	OOFL01000356	[OOFL] marine metagenome; seawater		1067	1139	+	Phe	GAA	[ENA]	◯
	>WENV183617993	OOFL01001030	[OOFL] marine metagenome; seawater		1103	1026	-	Arg	ACG	[ENA]	◯
	>WENV183617973	OOFL01000427	[OOFL] marine metagenome; seawater		1110	1039	-	Thr	TGT	[ENA]	◯
	>WENV183617984	OOFL01000736	[OOFL] marine metagenome; seawater		1129	1056	-	Arg	TCG	[ENA]	◯
	>WENV183617987	OOFL01000960	[OOFL] marine metagenome; seawater		1147	1071	-	Ile	GAT	[ENA]	◯
	>WENV183617986	OOFL01000755	[OOFL] marine metagenome; seawater		1156	1083	-	Phe	GAA	[ENA]	◯
	>WENV183617963	OOFL01000305	[OOFL] marine metagenome; seawater		1168	1096	-	Pro	AGG	[ENA]	◯
	>WENV183617972	OOFL01000427	[OOFL] marine metagenome; seawater		1228	1157	-	Gly	TCC	[ENA]	◯
	>WENV183617966	OOFL01000323	[OOFL] marine metagenome; seawater		1236	1163	-	His	GTG	[ENA]	◯
	>WENV183617962	OOFL01000305	[OOFL] marine metagenome; seawater		1254	1183	-	Gly	GCC	[ENA]	◯
	>WENV183617958	OOFL01000305	[OOFL] marine metagenome; seawater		1302	1378	+	Ile	TAT	[ENA]	◯
	>WENV183617979	OOFL01000619	[OOFL] marine metagenome; seawater		1393	1318	-	Thr	GGT	[ENA]	◯
	>WENV183617946	OOFL01000145	[OOFL] marine metagenome; seawater		1409	1334	-	Pro	TGG	[ENA]	◯
	>WENV183617969	OOFL01000405	[OOFL] marine metagenome; seawater		1506	1576	+	Cys	GCA	[ENA]	◯
	>WENV183617961	OOFL01000305	[OOFL] marine metagenome; seawater		1608	1534	-	Met	CAT	[ENA]	◯
	>WENV183617959	OOFL01000305	[OOFL] marine metagenome; seawater		1667	1748	+	Leu	CAA	[ENA]	◯
	>WENV183617941	OOFL01000057	[OOFL] marine metagenome; seawater		1727	1803	+	Ile	GAT	[ENA]	◯
	>WENV183617942	OOFL01000057	[OOFL] marine metagenome; seawater		1829	1903	+	Ala	TGC	[ENA]	◯
	>WENV183617960	OOFL01000305	[OOFL] marine metagenome; seawater		1839	1911	+	Ile	AAT	[ENA]	◯
	>WENV183617949	OOFL01000224	[OOFL] marine metagenome; seawater		1967	2041	+	Cys	GCA	[ENA]	◯
	>WENV183617950	OOFL01000224	[OOFL] marine metagenome; seawater		2055	2141	+	Leu	TAA	[ENA]	◯
	>WENV183617945	OOFL01000105	[OOFL] marine metagenome; seawater		3281	3208	-	Ala	TGC	[ENA]	◯
	>WENV183617938	OOFL01000021	[OOFL] marine metagenome; seawater		4773	4699	-	Asn	GTT	[ENA]	◯
	>WENV183617937	OOFL01000021	[OOFL] marine metagenome; seawater		4883	4809	-	Tyr	GTA	[ENA]	◯
	>WENV183617936	OOFL01000021	[OOFL] marine metagenome; seawater		4963	4889	-	Gln	TTG	[ENA]	◯
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence
View ClustalW result

BACK