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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OUMJ] metagenome; soil
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV183696813
OUMJ01000018
[OUMJ] metagenome; soil
332
257
-
His
GTG
[ENA]
¢þ
>WENV183696811
OUMJ01000006
[OUMJ] metagenome; soil
1056
983
-
Cys
GCA
[ENA]
¢þ
>WENV183696814
OUMJ01000021
[OUMJ] metagenome; soil
8024
8113
+
Ser
TGA
[ENA]
¢þ
>WENV183696818
OUMJ01000043
[OUMJ] metagenome; soil
11584
11660
+
Arg
ACG
[ENA]
¢þ
>WENV183696815
OUMJ01000023
[OUMJ] metagenome; soil
24458
24533
+
Gly
GCC
[ENA]
¢þ
>WENV183696816
OUMJ01000023
[OUMJ] metagenome; soil
24642
24717
+
Gly
GCC
[ENA]
¢þ
>WENV183696817
OUMJ01000023
[OUMJ] metagenome; soil
24830
24903
+
Cys
GCA
[ENA]
¢þ
>WENV183696812
OUMJ01000012
[OUMJ] metagenome; soil
45556
45631
+
Thr
TGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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