This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FLRN] metagenome; saliva
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180003679
FLRN01011756
[FLRN] metagenome; saliva
6
81
+
Pro
GGG
[ENA]
¢þ
>WENV180003680
FLRN01013061
[FLRN] metagenome; saliva
9
85
+
Pro
GGG
[ENA]
¢þ
>WENV180003691
FLRN01035630
[FLRN] metagenome; saliva
11
85
+
Arg
TCT
[ENA]
¢þ
>WENV180003686
FLRN01022768
[FLRN] metagenome; saliva
14
89
+
Phe
GAA
[ENA]
¢þ
>WENV180003678
FLRN01011074
[FLRN] metagenome; saliva
21
94
+
Gln
TTG
[ENA]
¢þ
>WENV180003662
FLRN01001772
[FLRN] metagenome; saliva
22
96
+
Glu
TTC
[ENA]
¢þ
>WENV180003695
FLRN01050812
[FLRN] metagenome; saliva
22
112
+
Ser
TGA
[ENA]
¢þ
>WENV180003699
FLRN01060513
[FLRN] metagenome; saliva
24
98
+
Gly
GCC
[ENA]
¢þ
>WENV180003670
FLRN01003899
[FLRN] metagenome; saliva
25
101
+
fMet
CAT
[ENA]
¢þ
>WENV180003667
FLRN01002382
[FLRN] metagenome; saliva
28
120
+
Ser
GCT
[ENA]
¢þ
>WENV180003700
FLRN01060520
[FLRN] metagenome; saliva
30
122
+
Ser
TGA
[ENA]
¢þ
>WENV180003705
FLRN01069645
[FLRN] metagenome; saliva
31
104
+
Arg
TCT
[ENA]
¢þ
>WENV180003683
FLRN01022090
[FLRN] metagenome; saliva
36
120
+
Leu
CAA
[ENA]
¢þ
>WENV180003702
FLRN01068688
[FLRN] metagenome; saliva
43
117
+
Ala
CGC
[ENA]
¢þ
>WENV180003701
FLRN01067317
[FLRN] metagenome; saliva
49
124
+
Ala
TGC
[ENA]
¢þ
>WENV180003661
FLRN01001265
[FLRN] metagenome; saliva
51
126
+
His
GTG
[ENA]
¢þ
>WENV180003688
FLRN01025101
[FLRN] metagenome; saliva
52
127
+
His
GTG
[ENA]
¢þ
>WENV180003672
FLRN01006174
[FLRN] metagenome; saliva
56
130
+
Cys
GCA
[ENA]
¢þ
>WENV180003673
FLRN01008074
[FLRN] metagenome; saliva
58
133
+
Asn
GTT
[ENA]
¢þ
>WENV180003694
FLRN01049710
[FLRN] metagenome; saliva
62
135
+
His
GTG
[ENA]
¢þ
>WENV180003676
FLRN01010362
[FLRN] metagenome; saliva
66
153
+
Ser
TGA
[ENA]
¢þ
>WENV180003649
FLRN01000042
[FLRN] metagenome; saliva
69
141
+
Asp
GTC
[ENA]
¢þ
>WENV180003669
FLRN01003701
[FLRN] metagenome; saliva
72
-1
-
Trp
CCA
[ENA]
¢þ
>WENV180003693
FLRN01049384
[FLRN] metagenome; saliva
75
149
+
Thr
GGT
[ENA]
¢þ
>WENV180003663
FLRN01002000
[FLRN] metagenome; saliva
77
2
-
Gln
TTG
[ENA]
¢þ
>WENV180003682
FLRN01017250
[FLRN] metagenome; saliva
79
162
+
Leu
TAA
[ENA]
¢þ
>WENV180003696
FLRN01054604
[FLRN] metagenome; saliva
81
9
-
Thr
TGT
[ENA]
¢þ
>WENV180003684
FLRN01022164
[FLRN] metagenome; saliva
83
7
-
Asn
GTT
[ENA]
¢þ
>WENV180003671
FLRN01005823
[FLRN] metagenome; saliva
84
1
-
Tyr
GTA
[ENA]
¢þ
>WENV180003665
FLRN01002146
[FLRN] metagenome; saliva
95
20
-
Met
CAT
[ENA]
¢þ
>WENV180003675
FLRN01010086
[FLRN] metagenome; saliva
96
20
-
Val
GAC
[ENA]
¢þ
>WENV180003668
FLRN01002867
[FLRN] metagenome; saliva
102
27
-
Lys
TTT
[ENA]
¢þ
>WENV180003685
FLRN01022522
[FLRN] metagenome; saliva
105
19
-
Tyr
GTA
[ENA]
¢þ
>WENV180003689
FLRN01034359
[FLRN] metagenome; saliva
106
32
-
Arg
TCT
[ENA]
¢þ
>WENV180003681
FLRN01016609
[FLRN] metagenome; saliva
107
31
-
Met
CAT
[ENA]
¢þ
>WENV180003703
FLRN01069269
[FLRN] metagenome; saliva
113
40
-
Arg
CCG
[ENA]
¢þ
>WENV180003687
FLRN01022957
[FLRN] metagenome; saliva
115
41
-
Lys
TTT
[ENA]
¢þ
>WENV180003690
FLRN01034543
[FLRN] metagenome; saliva
116
42
-
Ile2
CAT
[ENA]
¢þ
>WENV180003677
FLRN01011052
[FLRN] metagenome; saliva
117
43
-
Ile
GAT
[ENA]
¢þ
>WENV180003697
FLRN01055139
[FLRN] metagenome; saliva
119
26
-
Ser
GCT
[ENA]
¢þ
>WENV180003698
FLRN01058502
[FLRN] metagenome; saliva
129
54
-
Phe
GAA
[ENA]
¢þ
>WENV180003692
FLRN01048708
[FLRN] metagenome; saliva
132
45
-
Ser
CGA
[ENA]
¢þ
>WENV180003704
FLRN01069574
[FLRN] metagenome; saliva
139
67
-
Cys
GCA
[ENA]
¢þ
>WENV180003650
FLRN01000042
[FLRN] metagenome; saliva
166
238
+
Lys
TTT
[ENA]
¢þ
>WENV180003664
FLRN01002146
[FLRN] metagenome; saliva
170
97
-
Glu
TTC
[ENA]
¢þ
>WENV180003706
FLRN01070423
[FLRN] metagenome; saliva
210
124
-
Leu
CAG
[ENA]
¢þ
>WENV180003660
FLRN01001216
[FLRN] metagenome; saliva
227
155
-
Arg
TCT
[ENA]
¢þ
>WENV180003651
FLRN01000042
[FLRN] metagenome; saliva
243
326
+
Leu
TAG
[ENA]
¢þ
>WENV180003674
FLRN01009574
[FLRN] metagenome; saliva
288
363
+
Lys
CTT
[ENA]
¢þ
>WENV180003666
FLRN01002358
[FLRN] metagenome; saliva
363
438
+
Arg
CCG
[ENA]
¢þ
>WENV180003652
FLRN01000042
[FLRN] metagenome; saliva
403
486
+
Leu
TAG
[ENA]
¢þ
>WENV180003653
FLRN01000042
[FLRN] metagenome; saliva
504
576
+
Thr
TGT
[ENA]
¢þ
>WENV180003654
FLRN01000042
[FLRN] metagenome; saliva
599
670
+
Gly
GCC
[ENA]
¢þ
>WENV180003655
FLRN01000042
[FLRN] metagenome; saliva
678
763
+
Leu
TAA
[ENA]
¢þ
>WENV180003656
FLRN01000042
[FLRN] metagenome; saliva
775
848
+
Arg
ACG
[ENA]
¢þ
>WENV180003657
FLRN01000042
[FLRN] metagenome; saliva
863
938
+
Pro
TGG
[ENA]
¢þ
>WENV180003658
FLRN01000042
[FLRN] metagenome; saliva
942
1017
+
Met
CAT
[ENA]
¢þ
>WENV180003659
FLRN01000042
[FLRN] metagenome; saliva
1029
1104
+
Ile2
CAT
[ENA]
¢þ
>WENV180003646
FLRN01000022
[FLRN] metagenome; saliva
3463
3389
-
Ala
TGC
[ENA]
¢þ
>WENV180003648
FLRN01000024
[FLRN] metagenome; saliva
3750
3675
-
Ala
TGC
[ENA]
¢þ
>WENV180003647
FLRN01000024
[FLRN] metagenome; saliva
3832
3756
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK