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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
[FTAN] metagenome; soil
HIT:
5 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180018824
FTAN01000055
[FTAN] metagenome; soil
683
756
+
Gly
CCC
[ENA]
¢þ
>WENV180018823
FTAN01000017
[FTAN] metagenome; soil
1100
1176
+
Met
CAT
[ENA]
¢þ
>WENV180018821
FTAN01000002
[FTAN] metagenome; soil
4852
4777
-
Lys
TTT
[ENA]
¢þ
>WENV180018825
FTAN01000057
[FTAN] metagenome; soil
10722
10648
-
Lys
CTT
[ENA]
¢þ
>WENV180018822
FTAN01000015
[FTAN] metagenome; soil
16968
17057
+
Ser
CGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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