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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA gene List
[FTAZ] metagenome; soil
HIT:
5 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180018882
FTAZ01000049
[FTAZ] metagenome; soil
1478
1403
-
Ile2
CAT
[ENA]
¢þ
>WENV180018883
FTAZ01000062
[FTAZ] metagenome; soil
2632
2721
+
Ser
GGA
[ENA]
¢þ
>WENV180018880
FTAZ01000015
[FTAZ] metagenome; soil
7058
6982
-
fMet
CAT
[ENA]
¢þ
>WENV180018881
FTAZ01000046
[FTAZ] metagenome; soil
8447
8520
+
Gly
CCC
[ENA]
¢þ
>WENV180018879
FTAZ01000009
[FTAZ] metagenome; soil
10179
10103
-
Arg
CCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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