This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTBD] metagenome; soil
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180018943
FTBD01000104
[FTBD] metagenome; soil
761
833
+
Gly
GCC
[ENA]
¢þ
>WENV180018937
FTBD01000015
[FTBD] metagenome; soil
796
869
+
Thr
TGT
[ENA]
¢þ
>WENV180018944
FTBD01000104
[FTBD] metagenome; soil
903
976
+
Cys
GCA
[ENA]
¢þ
>WENV180018947
FTBD01000118
[FTBD] metagenome; soil
957
885
-
Gly
TCC
[ENA]
¢þ
>WENV180018945
FTBD01000104
[FTBD] metagenome; soil
1003
1075
+
Val
GAC
[ENA]
¢þ
>WENV180018946
FTBD01000118
[FTBD] metagenome; soil
1136
1213
+
Pro
TGG
[ENA]
¢þ
>WENV180018939
FTBD01000031
[FTBD] metagenome; soil
1228
1302
+
Gln
TTG
[ENA]
¢þ
>WENV180018941
FTBD01000076
[FTBD] metagenome; soil
1549
1624
+
Glu
CTC
[ENA]
¢þ
>WENV180018942
FTBD01000096
[FTBD] metagenome; soil
2231
2159
-
Gly
CCC
[ENA]
¢þ
>WENV180018936
FTBD01000009
[FTBD] metagenome; soil
2361
2436
+
Thr
CGT
[ENA]
¢þ
>WENV180018938
FTBD01000018
[FTBD] metagenome; soil
2450
2376
-
Ile2
CAT
[ENA]
¢þ
>WENV180018940
FTBD01000070
[FTBD] metagenome; soil
3135
3062
-
Lys
TTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK