This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTDU] metagenome; soil
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180021128
FTDU01001229
[FTDU] metagenome; soil
1
87
+
Leu
CAG
[ENA]
¢þ
>WENV180021117
FTDU01000806
[FTDU] metagenome; soil
11
85
+
Val
CAC
[ENA]
¢þ
>WENV180021118
FTDU01000819
[FTDU] metagenome; soil
13
98
+
Leu
CAA
[ENA]
¢þ
>WENV180021121
FTDU01000892
[FTDU] metagenome; soil
20
96
+
Met
CAT
[ENA]
¢þ
>WENV180021109
FTDU01000357
[FTDU] metagenome; soil
126
212
+
Leu
TAA
[ENA]
¢þ
>WENV180021124
FTDU01000995
[FTDU] metagenome; soil
225
298
+
Gln
TTG
[ENA]
¢þ
>WENV180021106
FTDU01000084
[FTDU] metagenome; soil
1195
1271
+
Pro
TGG
[ENA]
¢þ
>WENV180021111
FTDU01000572
[FTDU] metagenome; soil
1274
1177
-
SeC
TCA
[ENA]
¢þ
>WENV180021107
FTDU01000209
[FTDU] metagenome; soil
1329
1256
-
Cys
GCA
[ENA]
¢þ
>WENV180021110
FTDU01000473
[FTDU] metagenome; soil
1356
1281
-
Ala
CGC
[ENA]
¢þ
>WENV180021120
FTDU01000889
[FTDU] metagenome; soil
1424
1500
+
His
GTG
[ENA]
¢þ
>WENV180021123
FTDU01000984
[FTDU] metagenome; soil
1764
1840
+
Val
TAC
[ENA]
¢þ
>WENV180021125
FTDU01001059
[FTDU] metagenome; soil
1849
1938
+
Ser
TGA
[ENA]
¢þ
>WENV180021108
FTDU01000351
[FTDU] metagenome; soil
2095
2177
+
Leu
TAG
[ENA]
¢þ
>WENV180021116
FTDU01000750
[FTDU] metagenome; soil
2464
2550
+
Leu
CAG
[ENA]
¢þ
>WENV180021119
FTDU01000867
[FTDU] metagenome; soil
2562
2486
-
Pro
CGG
[ENA]
¢þ
>WENV180021126
FTDU01001076
[FTDU] metagenome; soil
2701
2790
+
Ser
GGA
[ENA]
¢þ
>WENV180021115
FTDU01000724
[FTDU] metagenome; soil
3000
3075
+
Thr
TGT
[ENA]
¢þ
>WENV180021112
FTDU01000616
[FTDU] metagenome; soil
3988
3912
-
Pro
GGG
[ENA]
¢þ
>WENV180021127
FTDU01001179
[FTDU] metagenome; soil
5042
5118
+
Ile2
CAT
[ENA]
¢þ
>WENV180021122
FTDU01000906
[FTDU] metagenome; soil
5549
5624
+
Phe
GAA
[ENA]
¢þ
>WENV180021114
FTDU01000644
[FTDU] metagenome; soil
10765
10841
+
Arg
TCT
[ENA]
¢þ
>WENV180021113
FTDU01000626
[FTDU] metagenome; soil
14084
14174
+
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK