This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTEH] metagenome; soil
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180021322
FTEH01001473
[FTEH] metagenome; soil
15
91
+
His
GTG
[ENA]
¢þ
>WENV180021315
FTEH01000950
[FTEH] metagenome; soil
25
99
+
Val
CAC
[ENA]
¢þ
>WENV180021320
FTEH01001283
[FTEH] metagenome; soil
25
99
+
Thr
GGT
[ENA]
¢þ
>WENV180021310
FTEH01000388
[FTEH] metagenome; soil
225
298
+
Gln
TTG
[ENA]
¢þ
>WENV180021312
FTEH01000433
[FTEH] metagenome; soil
769
683
-
Leu
TAA
[ENA]
¢þ
>WENV180021314
FTEH01000849
[FTEH] metagenome; soil
817
742
-
Thr
CGT
[ENA]
¢þ
>WENV180021309
FTEH01000344
[FTEH] metagenome; soil
980
1056
+
Arg
ACG
[ENA]
¢þ
>WENV180021308
FTEH01000201
[FTEH] metagenome; soil
983
907
-
Arg
CCG
[ENA]
¢þ
>WENV180021311
FTEH01000416
[FTEH] metagenome; soil
1101
1173
+
Thr
CGT
[ENA]
¢þ
>WENV180021321
FTEH01001404
[FTEH] metagenome; soil
2022
2104
+
Leu
TAG
[ENA]
¢þ
>WENV180021318
FTEH01001127
[FTEH] metagenome; soil
2119
2043
-
Pro
GGG
[ENA]
¢þ
>WENV180021313
FTEH01000518
[FTEH] metagenome; soil
2299
2224
-
Ala
CGC
[ENA]
¢þ
>WENV180021317
FTEH01001048
[FTEH] metagenome; soil
3276
3187
-
Ser
CGA
[ENA]
¢þ
>WENV180021316
FTEH01001048
[FTEH] metagenome; soil
4036
3962
-
Val
GAC
[ENA]
¢þ
>WENV180021319
FTEH01001176
[FTEH] metagenome; soil
7170
7079
-
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK