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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[FTFJ] metagenome; soil
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180022022
FTFJ01000883
[FTFJ] metagenome; soil
62
138
+
Pro
GGG
[ENA]
¢þ
>WENV180022021
FTFJ01000760
[FTFJ] metagenome; soil
176
92
-
Leu
TAG
[ENA]
¢þ
>WENV180022017
FTFJ01000277
[FTFJ] metagenome; soil
274
199
-
Phe
GAA
[ENA]
¢þ
>WENV180022023
FTFJ01001084
[FTFJ] metagenome; soil
809
883
+
Val
GAC
[ENA]
¢þ
>WENV180022016
FTFJ01000038
[FTFJ] metagenome; soil
1059
975
-
Leu
CAG
[ENA]
¢þ
>WENV180022024
FTFJ01001145
[FTFJ] metagenome; soil
1067
991
-
Arg
CCT
[ENA]
¢þ
>WENV180022018
FTFJ01000541
[FTFJ] metagenome; soil
1283
1357
+
Gly
CCC
[ENA]
¢þ
>WENV180022019
FTFJ01000628
[FTFJ] metagenome; soil
1586
1661
+
Thr
TGT
[ENA]
¢þ
>WENV180022020
FTFJ01000636
[FTFJ] metagenome; soil
2754
2846
+
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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