This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTFO] metagenome; soil
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180022093
FTFO01000296
[FTFO] metagenome; soil
12
96
+
Leu
GAG
[ENA]
¢þ
>WENV180022078
FTFO01000118
[FTFO] metagenome; soil
87
1
-
Ser
CGA
[ENA]
¢þ
>WENV180022091
FTFO01000265
[FTFO] metagenome; soil
366
452
+
Leu
TAG
[ENA]
¢þ
>WENV180022086
FTFO01000214
[FTFO] metagenome; soil
379
305
-
Arg
CCT
[ENA]
¢þ
>WENV180022084
FTFO01000178
[FTFO] metagenome; soil
940
1016
+
Gln
TTG
[ENA]
¢þ
>WENV180022080
FTFO01000146
[FTFO] metagenome; soil
1630
1554
-
Ile2
CAT
[ENA]
¢þ
>WENV180022090
FTFO01000259
[FTFO] metagenome; soil
2307
2383
+
Val
GAC
[ENA]
¢þ
>WENV180022085
FTFO01000185
[FTFO] metagenome; soil
3254
3178
-
Pro
CGG
[ENA]
¢þ
>WENV180022092
FTFO01000294
[FTFO] metagenome; soil
4161
4085
-
Arg
ACG
[ENA]
¢þ
>WENV180022094
FTFO01000308
[FTFO] metagenome; soil
4496
4421
-
Asn
GTT
[ENA]
¢þ
>WENV180022081
FTFO01000148
[FTFO] metagenome; soil
4714
4630
-
Leu
CAG
[ENA]
¢þ
>WENV180022095
FTFO01000317
[FTFO] metagenome; soil
8146
8071
-
Thr
TGT
[ENA]
¢þ
>WENV180022087
FTFO01000242
[FTFO] metagenome; soil
8223
8298
+
Ala
GGC
[ENA]
¢þ
>WENV180022088
FTFO01000242
[FTFO] metagenome; soil
8350
8425
+
Glu
TTC
[ENA]
¢þ
>WENV180022089
FTFO01000242
[FTFO] metagenome; soil
8529
8605
+
Asp
GTC
[ENA]
¢þ
>WENV180022079
FTFO01000134
[FTFO] metagenome; soil
9897
9970
+
Phe
GAA
[ENA]
¢þ
>WENV180022082
FTFO01000150
[FTFO] metagenome; soil
12536
12611
+
Val
TAC
[ENA]
¢þ
>WENV180022083
FTFO01000150
[FTFO] metagenome; soil
14645
14720
+
His
GTG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK