Home | tRNADB-CE : tRNA gene database curated manually by experts

This is the navigation skips to jump to main contents

Jump to main contents.

Top | Keyword | BLAST | Download | HOW TO USE

tRNA gene List

[FTFY] metagenome; soil

HIT: 56 sequence(s).

Download Sequence
View ClustalW result

The reliable tRNA genes	All candidate tRNA genes

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
	>WENV180022341	FTFY01001153	[FTFY] metagenome; soil		23	98	+	Arg	ACG	[ENA]	◯
	>WENV180022325	FTFY01000864	[FTFY] metagenome; soil		47	121	+	Val	CAC	[ENA]	◯
	>WENV180022321	FTFY01000808	[FTFY] metagenome; soil		78	3	-	Arg	CCG	[ENA]	◯
	>WENV180022339	FTFY01001070	[FTFY] metagenome; soil		80	5	-	Thr	TGT	[ENA]	◯
	>WENV180022295	FTFY01000093	[FTFY] metagenome; soil		86	14	-	Thr	CGT	[ENA]	◯
	>WENV180022310	FTFY01000516	[FTFY] metagenome; soil		101	27	-	Val	CAC	[ENA]	◯
	>WENV180022301	FTFY01000146	[FTFY] metagenome; soil		382	305	-	Arg	ACG	[ENA]	◯
	>WENV180022307	FTFY01000301	[FTFY] metagenome; soil		388	314	-	Thr	GGT	[ENA]	◯
	>WENV180022308	FTFY01000342	[FTFY] metagenome; soil		432	344	-	Leu	TAA	[ENA]	◯
	>WENV180022294	FTFY01000092	[FTFY] metagenome; soil		441	527	+	Leu	CAA	[ENA]	◯
	>WENV180022300	FTFY01000146	[FTFY] metagenome; soil		467	394	-	Gly	TCC	[ENA]	◯
	>WENV180022306	FTFY01000301	[FTFY] metagenome; soil		534	461	-	Gly	TCC	[ENA]	◯
	>WENV180022303	FTFY01000283	[FTFY] metagenome; soil		559	649	+	Ser	GGA	[ENA]	◯
	>WENV180022305	FTFY01000301	[FTFY] metagenome; soil		713	628	-	Tyr	GTA	[ENA]	◯
	>WENV180022299	FTFY01000146	[FTFY] metagenome; soil		800	726	-	Thr	GGT	[ENA]	◯
	>WENV180022298	FTFY01000146	[FTFY] metagenome; soil		884	809	-	Thr	CGT	[ENA]	◯
	>WENV180022302	FTFY01000246	[FTFY] metagenome; soil		923	850	-	Gln	TTG	[ENA]	◯
	>WENV180022297	FTFY01000146	[FTFY] metagenome; soil		975	897	-	Asp	GTC	[ENA]	◯
	>WENV180022309	FTFY01000365	[FTFY] metagenome; soil		1005	1076	+	Val	CAC	[ENA]	◯
	>WENV180022346	FTFY01001183	[FTFY] metagenome; soil		1146	1232	+	Leu	TAG	[ENA]	◯
	>WENV180022304	FTFY01000298	[FTFY] metagenome; soil		1181	1253	+	Val	GAC	[ENA]	◯
	>WENV180022311	FTFY01000579	[FTFY] metagenome; soil		1186	1112	-	Glu	CTC	[ENA]	◯
	>WENV180022335	FTFY01001015	[FTFY] metagenome; soil		1264	1339	+	Thr	CGT	[ENA]	◯
	>WENV180022324	FTFY01000849	[FTFY] metagenome; soil		1319	1403	+	Leu	CAG	[ENA]	◯
	>WENV180022312	FTFY01000588	[FTFY] metagenome; soil		1514	1439	-	Ala	CGC	[ENA]	◯
	>WENV180022296	FTFY01000111	[FTFY] metagenome; soil		1586	1511	-	Thr	CGT	[ENA]	◯
	>WENV180022342	FTFY01001154	[FTFY] metagenome; soil		2464	2550	+	Leu	TAA	[ENA]	◯
	>WENV180022313	FTFY01000637	[FTFY] metagenome; soil		2553	2477	-	Arg	ACG	[ENA]	◯
	>WENV180022322	FTFY01000810	[FTFY] metagenome; soil		2654	2578	-	Val	GAC	[ENA]	◯
	>WENV180022345	FTFY01001180	[FTFY] metagenome; soil		2945	2870	-	Phe	GAA	[ENA]	◯
	>WENV180022338	FTFY01001064	[FTFY] metagenome; soil		3747	3652	-	SeC	TCA	[ENA]	◯
	>WENV180022337	FTFY01001028	[FTFY] metagenome; soil		4330	4419	+	Ser	CGA	[ENA]	◯
	>WENV180022332	FTFY01000987	[FTFY] metagenome; soil		5015	5090	+	Lys	CTT	[ENA]	◯
	>WENV180022319	FTFY01000808	[FTFY] metagenome; soil		5068	5143	+	Val	TAC	[ENA]	◯
	>WENV180022320	FTFY01000808	[FTFY] metagenome; soil		5179	5255	+	Asp	GTC	[ENA]	◯
	>WENV180022318	FTFY01000775	[FTFY] metagenome; soil		6689	6764	+	Gly	GCC	[ENA]	◯
	>WENV180022293	FTFY01000012	[FTFY] metagenome; soil		8277	8201	-	fMet	CAT	[ENA]	◯
	>WENV180022292	FTFY01000012	[FTFY] metagenome; soil		8439	8363	-	fMet	CAT	[ENA]	◯
	>WENV180022340	FTFY01001148	[FTFY] metagenome; soil		10899	10815	-	Leu	GAG	[ENA]	◯
	>WENV180022331	FTFY01000950	[FTFY] metagenome; soil		11125	11201	+	Met	CAT	[ENA]	◯
	>WENV180022326	FTFY01000870	[FTFY] metagenome; soil		12278	12205	-	Gly	CCC	[ENA]	◯
	>WENV180022323	FTFY01000838	[FTFY] metagenome; soil		12826	12915	+	Ser	TGA	[ENA]	◯
	>WENV180022314	FTFY01000698	[FTFY] metagenome; soil		13729	13805	+	Pro	CGG	[ENA]	◯
	>WENV180022334	FTFY01001006	[FTFY] metagenome; soil		15817	15741	-	Arg	TCT	[ENA]	◯
	>WENV180022333	FTFY01001006	[FTFY] metagenome; soil		16008	15932	-	Pro	TGG	[ENA]	◯
	>WENV180022344	FTFY01001154	[FTFY] metagenome; soil		16666	16573	-	Ser	GCT	[ENA]	◯
	>WENV180022328	FTFY01000894	[FTFY] metagenome; soil		19232	19157	-	Trp	CCA	[ENA]	◯
	>WENV180022330	FTFY01000937	[FTFY] metagenome; soil		20815	20739	-	Asp	GTC	[ENA]	◯
	>WENV180022329	FTFY01000937	[FTFY] metagenome; soil		20947	20872	-	Val	TAC	[ENA]	◯
	>WENV180022347	FTFY01001206	[FTFY] metagenome; soil		25217	25292	+	Asn	GTT	[ENA]	◯
	>WENV180022336	FTFY01001022	[FTFY] metagenome; soil		25681	25756	+	Lys	TTT	[ENA]	◯
	>WENV180022343	FTFY01001154	[FTFY] metagenome; soil		30079	30163	+	Leu	CAG	[ENA]	◯
	>WENV180022315	FTFY01000755	[FTFY] metagenome; soil		31540	31615	+	Ala	GGC	[ENA]	◯
	>WENV180022316	FTFY01000755	[FTFY] metagenome; soil		31667	31742	+	Glu	TTC	[ENA]	◯
	>WENV180022317	FTFY01000755	[FTFY] metagenome; soil		31946	32021	+	Glu	TTC	[ENA]	◯
	>WENV180022327	FTFY01000871	[FTFY] metagenome; soil		37457	37381	-	Gln	TTG	[ENA]	◯
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

Download Sequence
View ClustalW result

BACK