This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTFZ] metagenome; soil
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180022352
FTFZ01000338
[FTFZ] metagenome; soil
8
82
+
Gly
GCC
[ENA]
¢þ
>WENV180022360
FTFZ01000842
[FTFZ] metagenome; soil
61
150
+
Ser
GCT
[ENA]
¢þ
>WENV180022362
FTFZ01000928
[FTFZ] metagenome; soil
80
5
-
Asn
GTT
[ENA]
¢þ
>WENV180022350
FTFZ01000299
[FTFZ] metagenome; soil
188
112
-
Arg
TCG
[ENA]
¢þ
>WENV180022355
FTFZ01000358
[FTFZ] metagenome; soil
270
345
+
Thr
TGT
[ENA]
¢þ
>WENV180022348
FTFZ01000136
[FTFZ] metagenome; soil
369
443
+
Gln
TTG
[ENA]
¢þ
>WENV180022353
FTFZ01000346
[FTFZ] metagenome; soil
420
337
-
Leu
TAA
[ENA]
¢þ
>WENV180022356
FTFZ01000560
[FTFZ] metagenome; soil
800
885
+
Tyr
GTA
[ENA]
¢þ
>WENV180022351
FTFZ01000326
[FTFZ] metagenome; soil
860
936
+
Arg
TCG
[ENA]
¢þ
>WENV180022357
FTFZ01000560
[FTFZ] metagenome; soil
950
1023
+
Gly
TCC
[ENA]
¢þ
>WENV180022359
FTFZ01000790
[FTFZ] metagenome; soil
963
889
-
Gly
GCC
[ENA]
¢þ
>WENV180022358
FTFZ01000708
[FTFZ] metagenome; soil
1015
941
-
Glu
TTC
[ENA]
¢þ
>WENV180022354
FTFZ01000357
[FTFZ] metagenome; soil
1039
1113
+
Gly
CCC
[ENA]
¢þ
>WENV180022364
FTFZ01001115
[FTFZ] metagenome; soil
1332
1418
+
Leu
CAA
[ENA]
¢þ
>WENV180022349
FTFZ01000206
[FTFZ] metagenome; soil
1727
1652
-
Trp
CCA
[ENA]
¢þ
>WENV180022361
FTFZ01000909
[FTFZ] metagenome; soil
2421
2507
+
Leu
TAA
[ENA]
¢þ
>WENV180022363
FTFZ01000981
[FTFZ] metagenome; soil
3218
3293
+
Ala
GGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK