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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[FTGA] metagenome; soil
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180022366
FTGA01000395
[FTGA] metagenome; soil
20
96
+
Asp
GTC
[ENA]
¢þ
>WENV180022370
FTGA01000883
[FTGA] metagenome; soil
749
825
+
Arg
TCG
[ENA]
¢þ
>WENV180022369
FTGA01000796
[FTGA] metagenome; soil
1082
1171
+
Ser
CGA
[ENA]
¢þ
>WENV180022365
FTGA01000103
[FTGA] metagenome; soil
1210
1285
+
Ala
GGC
[ENA]
¢þ
>WENV180022368
FTGA01000741
[FTGA] metagenome; soil
1247
1163
-
Leu
TAG
[ENA]
¢þ
>WENV180022372
FTGA01001107
[FTGA] metagenome; soil
3056
2972
-
Leu
GAG
[ENA]
¢þ
>WENV180022371
FTGA01001098
[FTGA] metagenome; soil
3188
3262
+
Gln
TTG
[ENA]
¢þ
>WENV180022373
FTGA01001135
[FTGA] metagenome; soil
5238
5313
+
Phe
GAA
[ENA]
¢þ
>WENV180022367
FTGA01000678
[FTGA] metagenome; soil
10725
10800
+
Glu
CTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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