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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[FTGO] metagenome; soil
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180022685
FTGO01000415
[FTGO] metagenome; soil
25
101
+
Pro
TGG
[ENA]
¢þ
>WENV180022678
FTGO01000113
[FTGO] metagenome; soil
138
64
-
Val
GAC
[ENA]
¢þ
>WENV180022686
FTGO01000415
[FTGO] metagenome; soil
494
570
+
Arg
TCT
[ENA]
¢þ
>WENV180022682
FTGO01000358
[FTGO] metagenome; soil
1190
1101
-
Ser
TGA
[ENA]
¢þ
>WENV180022681
FTGO01000357
[FTGO] metagenome; soil
2677
2591
-
Leu
CAG
[ENA]
¢þ
>WENV180022684
FTGO01000386
[FTGO] metagenome; soil
3099
3023
-
Pro
CGG
[ENA]
¢þ
>WENV180022683
FTGO01000386
[FTGO] metagenome; soil
3243
3316
+
Gln
TTG
[ENA]
¢þ
>WENV180022680
FTGO01000340
[FTGO] metagenome; soil
3267
3191
-
Met
CAT
[ENA]
¢þ
>WENV180022679
FTGO01000340
[FTGO] metagenome; soil
4621
4696
+
Ala
CGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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