This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTIO] metagenome; soil
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180025347
FTIO01020579
[FTIO] metagenome; soil
3
78
+
Lys
CTT
[ENA]
¢þ
>WENV180025336
FTIO01002976
[FTIO] metagenome; soil
8
91
+
Leu
CAA
[ENA]
¢þ
>WENV180025345
FTIO01015209
[FTIO] metagenome; soil
18
90
+
His
GTG
[ENA]
¢þ
>WENV180025337
FTIO01005880
[FTIO] metagenome; soil
24
97
+
Pro
CGG
[ENA]
¢þ
>WENV180025342
FTIO01010222
[FTIO] metagenome; soil
56
138
+
Tyr
GTA
[ENA]
¢þ
>WENV180025339
FTIO01007550
[FTIO] metagenome; soil
72
1
-
Lys
TTT
[ENA]
¢þ
>WENV180025344
FTIO01015139
[FTIO] metagenome; soil
77
1
-
Arg
ACG
[ENA]
¢þ
>WENV180025346
FTIO01015358
[FTIO] metagenome; soil
99
12
-
Ser
TGA
[ENA]
¢þ
>WENV180025343
FTIO01013762
[FTIO] metagenome; soil
107
15
-
Leu
TAA
[ENA]
¢þ
>WENV180025338
FTIO01006944
[FTIO] metagenome; soil
120
194
+
Glu
TTC
[ENA]
¢þ
>WENV180025335
FTIO01002860
[FTIO] metagenome; soil
157
67
-
Ser
GGA
[ENA]
¢þ
>WENV180025341
FTIO01007653
[FTIO] metagenome; soil
242
170
-
Gly
CCC
[ENA]
¢þ
>WENV180025334
FTIO01001140
[FTIO] metagenome; soil
336
409
+
Thr
GGT
[ENA]
¢þ
>WENV180025340
FTIO01007564
[FTIO] metagenome; soil
340
251
-
Ser
CGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK