This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTIS] metagenome; soil
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180026255
FTIS01027781
[FTIS] metagenome; soil
7
78
+
Lys
TTT
[ENA]
¢þ
>WENV180026247
FTIS01004182
[FTIS] metagenome; soil
64
148
+
Leu
CAA
[ENA]
¢þ
>WENV180026248
FTIS01005839
[FTIS] metagenome; soil
76
1
-
Lys
TTT
[ENA]
¢þ
>WENV180026249
FTIS01008876
[FTIS] metagenome; soil
78
3
-
Arg
ACG
[ENA]
¢þ
>WENV180026254
FTIS01027153
[FTIS] metagenome; soil
92
16
-
Arg
TCT
[ENA]
¢þ
>WENV180026252
FTIS01024506
[FTIS] metagenome; soil
111
21
-
Ser
GGA
[ENA]
¢þ
>WENV180026253
FTIS01027029
[FTIS] metagenome; soil
115
42
-
Thr
GGT
[ENA]
¢þ
>WENV180026250
FTIS01014046
[FTIS] metagenome; soil
119
48
-
His
GTG
[ENA]
¢þ
>WENV180026251
FTIS01014059
[FTIS] metagenome; soil
121
45
-
Leu
CAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK