This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTJS] metagenome; soil
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180031818
FTJS01216696
[FTJS] metagenome; soil
1
76
+
Phe
GAA
[ENA]
¢þ
>WENV180031845
FTJS01577707
[FTJS] metagenome; soil
2
73
+
Thr
TGT
[ENA]
¢þ
>WENV180031847
FTJS01609742
[FTJS] metagenome; soil
2
76
+
Arg
CCT
[ENA]
¢þ
>WENV180031747
FTJS01007818
[FTJS] metagenome; soil
3
95
+
Ser
GCT
[ENA]
¢þ
>WENV180031746
FTJS01004269
[FTJS] metagenome; soil
4
76
+
Glu
CTC
[ENA]
¢þ
>WENV180031835
FTJS01374579
[FTJS] metagenome; soil
4
78
+
Gly
TCC
[ENA]
¢þ
>WENV180031808
FTJS01162777
[FTJS] metagenome; soil
6
81
+
Asn
GTT
[ENA]
¢þ
>WENV180031755
FTJS01015811
[FTJS] metagenome; soil
9
79
+
Ala
TGC
[ENA]
¢þ
>WENV180031838
FTJS01421924
[FTJS] metagenome; soil
9
80
+
Gly
GCC
[ENA]
¢þ
>WENV180031784
FTJS01051155
[FTJS] metagenome; soil
13
86
+
Arg
TCG
[ENA]
¢þ
>WENV180031844
FTJS01568780
[FTJS] metagenome; soil
14
85
+
Cys
GCA
[ENA]
¢þ
>WENV180031843
FTJS01514469
[FTJS] metagenome; soil
16
91
+
Trp
CCA
[ENA]
¢þ
>WENV180031827
FTJS01273411
[FTJS] metagenome; soil
19
90
+
Lys
CTT
[ENA]
¢þ
>WENV180031842
FTJS01471907
[FTJS] metagenome; soil
19
92
+
Gly
TCC
[ENA]
¢þ
>WENV180031854
FTJS01729990
[FTJS] metagenome; soil
20
91
+
Pro
TGG
[ENA]
¢þ
>WENV180031811
FTJS01177205
[FTJS] metagenome; soil
20
92
+
Gly
GCC
[ENA]
¢þ
>WENV180031812
FTJS01177778
[FTJS] metagenome; soil
20
93
+
Lys
CTT
[ENA]
¢þ
>WENV180031846
FTJS01606827
[FTJS] metagenome; soil
20
94
+
Gly
CCC
[ENA]
¢þ
>WENV180031840
FTJS01431402
[FTJS] metagenome; soil
21
93
+
Arg
CCG
[ENA]
¢þ
>WENV180031814
FTJS01181378
[FTJS] metagenome; soil
22
94
+
Met
CAT
[ENA]
¢þ
>WENV180031822
FTJS01243329
[FTJS] metagenome; soil
23
97
+
Gly
TCC
[ENA]
¢þ
>WENV180031800
FTJS01133443
[FTJS] metagenome; soil
24
94
+
Trp
CCA
[ENA]
¢þ
>WENV180031852
FTJS01690467
[FTJS] metagenome; soil
27
98
+
Asn
GTT
[ENA]
¢þ
>WENV180031853
FTJS01708969
[FTJS] metagenome; soil
28
100
+
Asp
GTC
[ENA]
¢þ
>WENV180031776
FTJS01035776
[FTJS] metagenome; soil
29
100
+
Gly
TCC
[ENA]
¢þ
>WENV180031804
FTJS01147506
[FTJS] metagenome; soil
38
112
+
Lys
TTT
[ENA]
¢þ
>WENV180031813
FTJS01180840
[FTJS] metagenome; soil
47
135
+
Ser
GCT
[ENA]
¢þ
>WENV180031820
FTJS01223101
[FTJS] metagenome; soil
50
122
+
Gln
TTG
[ENA]
¢þ
>WENV180031836
FTJS01391928
[FTJS] metagenome; soil
50
125
+
Ala
TGC
[ENA]
¢þ
>WENV180031810
FTJS01170995
[FTJS] metagenome; soil
55
128
+
Trp
CCA
[ENA]
¢þ
>WENV180031754
FTJS01013997
[FTJS] metagenome; soil
56
132
+
fMet
CAT
[ENA]
¢þ
>WENV180031778
FTJS01038444
[FTJS] metagenome; soil
63
137
+
Thr
GGT
[ENA]
¢þ
>WENV180031826
FTJS01269453
[FTJS] metagenome; soil
75
157
+
Leu
TAG
[ENA]
¢þ
>WENV180031801
FTJS01143645
[FTJS] metagenome; soil
77
7
-
Gly
TCC
[ENA]
¢þ
>WENV180031839
FTJS01424800
[FTJS] metagenome; soil
80
6
-
Pro
TGG
[ENA]
¢þ
>WENV180031773
FTJS01034189
[FTJS] metagenome; soil
81
154
+
Met
CAT
[ENA]
¢þ
>WENV180031769
FTJS01027937
[FTJS] metagenome; soil
82
156
+
Glu
TTC
[ENA]
¢þ
>WENV180031779
FTJS01042571
[FTJS] metagenome; soil
83
11
-
Arg
TCG
[ENA]
¢þ
>WENV180031832
FTJS01308059
[FTJS] metagenome; soil
84
14
-
Thr
CGT
[ENA]
¢þ
>WENV180031841
FTJS01433539
[FTJS] metagenome; soil
87
15
-
Phe
GAA
[ENA]
¢þ
>WENV180031837
FTJS01415387
[FTJS] metagenome; soil
89
16
-
Thr
CGT
[ENA]
¢þ
>WENV180031745
FTJS01003881
[FTJS] metagenome; soil
93
23
-
Sup
TCA
[ENA]
¢þ
>WENV180031850
FTJS01645225
[FTJS] metagenome; soil
95
17
-
Asn
GTT
[ENA]
¢þ
>WENV180031851
FTJS01661383
[FTJS] metagenome; soil
95
21
-
Phe
AAA
[ENA]
¢þ
>WENV180031833
FTJS01316502
[FTJS] metagenome; soil
95
24
-
Lys
TTT
[ENA]
¢þ
>WENV180031807
FTJS01161463
[FTJS] metagenome; soil
96
23
-
Asn
GTT
[ENA]
¢þ
>WENV180031803
FTJS01144802
[FTJS] metagenome; soil
97
21
-
Pro
GGG
[ENA]
¢þ
>WENV180031786
FTJS01053679
[FTJS] metagenome; soil
99
26
-
Gln
TTG
[ENA]
¢þ
>WENV180031796
FTJS01095952
[FTJS] metagenome; soil
99
26
-
Phe
GAA
[ENA]
¢þ
>WENV180031849
FTJS01644679
[FTJS] metagenome; soil
99
28
-
Gln
CTG
[ENA]
¢þ
>WENV180031805
FTJS01153893
[FTJS] metagenome; soil
100
11
-
Ser
GCT
[ENA]
¢þ
>WENV180031791
FTJS01075484
[FTJS] metagenome; soil
103
28
-
Asp
GTC
[ENA]
¢þ
>WENV180031848
FTJS01624261
[FTJS] metagenome; soil
103
33
-
Met
CAT
[ENA]
¢þ
>WENV180031757
FTJS01016008
[FTJS] metagenome; soil
103
176
+
His
GTG
[ENA]
¢þ
>WENV180031756
FTJS01015811
[FTJS] metagenome; soil
103
185
+
Ser
TGA
[ENA]
¢þ
>WENV180031781
FTJS01043432
[FTJS] metagenome; soil
106
180
+
Arg
TCT
[ENA]
¢þ
>WENV180031795
FTJS01089207
[FTJS] metagenome; soil
107
35
-
Met
CAT
[ENA]
¢þ
>WENV180031790
FTJS01074404
[FTJS] metagenome; soil
113
37
-
Ile
GAT
[ENA]
¢þ
>WENV180031819
FTJS01217261
[FTJS] metagenome; soil
115
44
-
Val
CAC
[ENA]
¢þ
>WENV180031794
FTJS01087646
[FTJS] metagenome; soil
118
44
-
Thr
GGT
[ENA]
¢þ
>WENV180031831
FTJS01299687
[FTJS] metagenome; soil
118
47
-
Glu
TTC
[ENA]
¢þ
>WENV180031830
FTJS01293028
[FTJS] metagenome; soil
119
45
-
Gly
GCC
[ENA]
¢þ
>WENV180031793
FTJS01083607
[FTJS] metagenome; soil
123
36
-
Ser
TGA
[ENA]
¢þ
>WENV180031799
FTJS01130784
[FTJS] metagenome; soil
126
197
+
Gly
CCC
[ENA]
¢þ
>WENV180031828
FTJS01287157
[FTJS] metagenome; soil
129
217
+
Leu
TAA
[ENA]
¢þ
>WENV180031768
FTJS01025781
[FTJS] metagenome; soil
134
61
-
His
GTG
[ENA]
¢þ
>WENV180031802
FTJS01144110
[FTJS] metagenome; soil
136
65
-
Val
TAC
[ENA]
¢þ
>WENV180031783
FTJS01050742
[FTJS] metagenome; soil
141
67
-
Arg
TCG
[ENA]
¢þ
>WENV180031824
FTJS01246847
[FTJS] metagenome; soil
141
68
-
Thr
GGT
[ENA]
¢þ
>WENV180031780
FTJS01043368
[FTJS] metagenome; soil
145
71
-
Asn
GTT
[ENA]
¢þ
>WENV180031777
FTJS01037895
[FTJS] metagenome; soil
145
74
-
Met
CAT
[ENA]
¢þ
>WENV180031749
FTJS01011303
[FTJS] metagenome; soil
146
69
-
His
GTG
[ENA]
¢þ
>WENV180031758
FTJS01016394
[FTJS] metagenome; soil
148
75
-
Val
CAC
[ENA]
¢þ
>WENV180031782
FTJS01047161
[FTJS] metagenome; soil
150
226
+
Pro
TGG
[ENA]
¢þ
>WENV180031764
FTJS01018244
[FTJS] metagenome; soil
151
71
-
Ser
GCT
[ENA]
¢þ
>WENV180031752
FTJS01013128
[FTJS] metagenome; soil
151
78
-
Gln
TTG
[ENA]
¢þ
>WENV180031789
FTJS01069320
[FTJS] metagenome; soil
155
63
-
Leu
TAA
[ENA]
¢þ
>WENV180031816
FTJS01182290
[FTJS] metagenome; soil
158
82
-
Pro
CGG
[ENA]
¢þ
>WENV180031774
FTJS01034189
[FTJS] metagenome; soil
161
233
+
Met
CAT
[ENA]
¢þ
>WENV180031744
FTJS01003881
[FTJS] metagenome; soil
170
98
-
Phe
GAA
[ENA]
¢þ
>WENV180031785
FTJS01052368
[FTJS] metagenome; soil
172
98
-
Thr
CGT
[ENA]
¢þ
>WENV180031834
FTJS01349768
[FTJS] metagenome; soil
174
104
-
Glu
TTC
[ENA]
¢þ
>WENV180031753
FTJS01013993
[FTJS] metagenome; soil
176
252
+
Arg
TCT
[ENA]
¢þ
>WENV180031750
FTJS01011851
[FTJS] metagenome; soil
180
107
-
Gly
TCC
[ENA]
¢þ
>WENV180031759
FTJS01017476
[FTJS] metagenome; soil
183
112
-
Asp
GTC
[ENA]
¢þ
>WENV180031792
FTJS01083607
[FTJS] metagenome; soil
198
126
-
Ile
GAT
[ENA]
¢þ
>WENV180031772
FTJS01033551
[FTJS] metagenome; soil
200
127
-
Gln
CTG
[ENA]
¢þ
>WENV180031766
FTJS01023771
[FTJS] metagenome; soil
202
116
-
Tyr
GTA
[ENA]
¢þ
>WENV180031797
FTJS01107544
[FTJS] metagenome; soil
207
283
+
Arg
TCT
[ENA]
¢þ
>WENV180031829
FTJS01289063
[FTJS] metagenome; soil
212
287
+
Thr
CGT
[ENA]
¢þ
>WENV180031742
FTJS01002241
[FTJS] metagenome; soil
213
131
-
Leu
CAA
[ENA]
¢þ
>WENV180031775
FTJS01035420
[FTJS] metagenome; soil
213
289
+
His
GTG
[ENA]
¢þ
>WENV180031825
FTJS01258555
[FTJS] metagenome; soil
217
144
-
Asn
GTT
[ENA]
¢þ
>WENV180031763
FTJS01018244
[FTJS] metagenome; soil
226
152
-
Arg
GCG
[ENA]
¢þ
>WENV180031751
FTJS01013128
[FTJS] metagenome; soil
228
157
-
Asp
GTC
[ENA]
¢þ
>WENV180031823
FTJS01243874
[FTJS] metagenome; soil
245
161
-
Leu
CAG
[ENA]
¢þ
>WENV180031798
FTJS01114401
[FTJS] metagenome; soil
265
194
-
Thr
TGT
[ENA]
¢þ
>WENV180031770
FTJS01028055
[FTJS] metagenome; soil
274
201
-
Phe
GAA
[ENA]
¢þ
>WENV180031743
FTJS01003389
[FTJS] metagenome; soil
280
350
+
Arg
ACG
[ENA]
¢þ
>WENV180031741
FTJS01002241
[FTJS] metagenome; soil
287
215
-
Pro
TGG
[ENA]
¢þ
>WENV180031788
FTJS01069320
[FTJS] metagenome; soil
300
227
-
Cys
GCA
[ENA]
¢þ
>WENV180031815
FTJS01182290
[FTJS] metagenome; soil
315
388
+
Gln
TTG
[ENA]
¢þ
>WENV180031748
FTJS01011303
[FTJS] metagenome; soil
316
245
-
Leu
TAG
[ENA]
¢þ
>WENV180031817
FTJS01193553
[FTJS] metagenome; soil
358
434
+
fMet
CAT
[ENA]
¢þ
>WENV180031762
FTJS01018244
[FTJS] metagenome; soil
362
288
-
Trp
CCA
[ENA]
¢þ
>WENV180031821
FTJS01234307
[FTJS] metagenome; soil
374
298
-
Pro
CGG
[ENA]
¢þ
>WENV180031740
FTJS01002241
[FTJS] metagenome; soil
409
325
-
Ser
TGA
[ENA]
¢þ
>WENV180031761
FTJS01018244
[FTJS] metagenome; soil
435
365
-
Lys
TTT
[ENA]
¢þ
>WENV180031765
FTJS01020381
[FTJS] metagenome; soil
449
541
+
SeC
TCA
[ENA]
¢þ
>WENV180031787
FTJS01069320
[FTJS] metagenome; soil
459
384
-
Gly
GCC
[ENA]
¢þ
>WENV180031767
FTJS01025781
[FTJS] metagenome; soil
474
391
-
Leu
TAG
[ENA]
¢þ
>WENV180031760
FTJS01018244
[FTJS] metagenome; soil
507
436
-
Ala
TGC
[ENA]
¢þ
>WENV180031771
FTJS01028730
[FTJS] metagenome; soil
522
593
+
Sup
TCA
[ENA]
¢þ
>WENV180031733
FTJS01000047
[FTJS] metagenome; soil
536
463
-
Asp
GTC
[ENA]
¢þ
>WENV180031809
FTJS01164082
[FTJS] metagenome; soil
585
509
-
His
GTG
[ENA]
¢þ
>WENV180031806
FTJS01154882
[FTJS] metagenome; soil
768
694
-
Val
GAC
[ENA]
¢þ
>WENV180031739
FTJS01002241
[FTJS] metagenome; soil
836
763
-
Val
CAC
[ENA]
¢þ
>WENV180031738
FTJS01002241
[FTJS] metagenome; soil
922
849
-
Arg
TCT
[ENA]
¢þ
>WENV180031737
FTJS01002241
[FTJS] metagenome; soil
1026
948
-
Tyr
GTA
[ENA]
¢þ
>WENV180031736
FTJS01002241
[FTJS] metagenome; soil
1101
1028
-
Thr
TGT
[ENA]
¢þ
>WENV180031734
FTJS01000321
[FTJS] metagenome; soil
1230
1301
+
Arg
TCG
[ENA]
¢þ
>WENV180031735
FTJS01001057
[FTJS] metagenome; soil
1707
1624
-
Tyr
GTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK