This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[FTKH] metagenome; soil
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180033353
FTKH01051546
[FTKH] metagenome; soil
2
78
+
Arg
TCT
[ENA]
¢þ
>WENV180033358
FTKH01079719
[FTKH] metagenome; soil
3
79
+
Pro
GGG
[ENA]
¢þ
>WENV180033356
FTKH01069029
[FTKH] metagenome; soil
12
86
+
Asn
GTT
[ENA]
¢þ
>WENV180033342
FTKH01008089
[FTKH] metagenome; soil
19
93
+
Pro
TGG
[ENA]
¢þ
>WENV180033345
FTKH01011120
[FTKH] metagenome; soil
48
120
+
His
GTG
[ENA]
¢þ
>WENV180033354
FTKH01057224
[FTKH] metagenome; soil
56
129
+
Gln
TTG
[ENA]
¢þ
>WENV180033359
FTKH01087113
[FTKH] metagenome; soil
86
10
-
Met
CAT
[ENA]
¢þ
>WENV180033361
FTKH01091040
[FTKH] metagenome; soil
93
3
-
Ser
GCT
[ENA]
¢þ
>WENV180033337
FTKH01000202
[FTKH] metagenome; soil
105
180
+
Ala
CGC
[ENA]
¢þ
>WENV180033348
FTKH01023546
[FTKH] metagenome; soil
110
34
-
Arg
TCG
[ENA]
¢þ
>WENV180033355
FTKH01060221
[FTKH] metagenome; soil
162
88
-
Thr
TGT
[ENA]
¢þ
>WENV180033346
FTKH01014698
[FTKH] metagenome; soil
173
97
-
Arg
CCT
[ENA]
¢þ
>WENV180033351
FTKH01040022
[FTKH] metagenome; soil
174
263
+
Ser
TGA
[ENA]
¢þ
>WENV180033340
FTKH01002359
[FTKH] metagenome; soil
187
114
-
His
GTG
[ENA]
¢þ
>WENV180033360
FTKH01087186
[FTKH] metagenome; soil
206
280
+
Val
CAC
[ENA]
¢þ
>WENV180033352
FTKH01050396
[FTKH] metagenome; soil
211
136
-
Gln
CTG
[ENA]
¢þ
>WENV180033350
FTKH01039437
[FTKH] metagenome; soil
214
139
-
Thr
CGT
[ENA]
¢þ
>WENV180033339
FTKH01002079
[FTKH] metagenome; soil
226
149
-
Met
CAT
[ENA]
¢þ
>WENV180033357
FTKH01078034
[FTKH] metagenome; soil
272
196
-
Arg
TCT
[ENA]
¢þ
>WENV180033349
FTKH01025314
[FTKH] metagenome; soil
310
402
+
SeC
TCA
[ENA]
¢þ
>WENV180033343
FTKH01008089
[FTKH] metagenome; soil
338
413
+
Phe
GAA
[ENA]
¢þ
>WENV180033341
FTKH01007611
[FTKH] metagenome; soil
349
423
+
Glu
CTC
[ENA]
¢þ
>WENV180033344
FTKH01008873
[FTKH] metagenome; soil
380
455
+
Glu
CTC
[ENA]
¢þ
>WENV180033347
FTKH01014971
[FTKH] metagenome; soil
466
552
+
Leu
CAA
[ENA]
¢þ
>WENV180033336
FTKH01000033
[FTKH] metagenome; soil
972
896
-
Leu
CAG
[ENA]
¢þ
>WENV180033335
FTKH01000033
[FTKH] metagenome; soil
1052
977
-
Val
TAC
[ENA]
¢þ
>WENV180033338
FTKH01000647
[FTKH] metagenome; soil
1112
1187
+
Thr
CGT
[ENA]
¢þ
>WENV180033334
FTKH01000033
[FTKH] metagenome; soil
1205
1133
-
Arg
CCT
[ENA]
¢þ
>WENV180033333
FTKH01000033
[FTKH] metagenome; soil
1283
1210
-
Arg
CCG
[ENA]
¢þ
>WENV180033332
FTKH01000033
[FTKH] metagenome; soil
1418
1345
-
Arg
ACG
[ENA]
¢þ
>WENV180033331
FTKH01000033
[FTKH] metagenome; soil
1644
1571
-
Phe
GAA
[ENA]
¢þ
>WENV180033330
FTKH01000033
[FTKH] metagenome; soil
1722
1648
-
Asp
GTC
[ENA]
¢þ
>WENV180033329
FTKH01000033
[FTKH] metagenome; soil
2032
1957
-
Pro
CGG
[ENA]
¢þ
>WENV180033328
FTKH01000033
[FTKH] metagenome; soil
2116
2043
-
Glu
TTC
[ENA]
¢þ
>WENV180033327
FTKH01000033
[FTKH] metagenome; soil
2346
2270
-
Asn
GTT
[ENA]
¢þ
>WENV180033326
FTKH01000033
[FTKH] metagenome; soil
2501
2428
-
Gln
CTG
[ENA]
¢þ
>WENV180033325
FTKH01000033
[FTKH] metagenome; soil
2579
2506
-
Gln
TTG
[ENA]
¢þ
>WENV180033324
FTKH01000033
[FTKH] metagenome; soil
2652
2579
-
Gly
TCC
[ENA]
¢þ
>WENV180033323
FTKH01000033
[FTKH] metagenome; soil
2730
2654
-
Lys
TTT
[ENA]
¢þ
>WENV180033322
FTKH01000033
[FTKH] metagenome; soil
2812
2737
-
Lys
CTT
[ENA]
¢þ
>WENV180033321
FTKH01000033
[FTKH] metagenome; soil
3086
3013
-
Gly
GCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK