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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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|
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HOW TO USE
tRNA gene List
[FUHP] jellyfish metagenome; jellyfish
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170596489
FUHP01000032
[FUHP] jellyfish metagenome; jellyfish
844
770
-
Arg
TCG
[ENA]
¢þ
>WENV170596487
FUHP01000025
[FUHP] jellyfish metagenome; jellyfish
3088
3002
-
Leu
GAG
[ENA]
¢þ
>WENV170596485
FUHP01000017
[FUHP] jellyfish metagenome; jellyfish
6481
6410
-
Gly
GCC
[ENA]
¢þ
>WENV170596488
FUHP01000028
[FUHP] jellyfish metagenome; jellyfish
7043
7115
+
Met
CAT
[ENA]
¢þ
>WENV170596457
FUHP01000002
[FUHP] jellyfish metagenome; jellyfish
15854
15928
+
Arg
ACG
[ENA]
¢þ
>WENV170596486
FUHP01000018
[FUHP] jellyfish metagenome; jellyfish
16958
16887
-
Gln
TTG
[ENA]
¢þ
>WENV170596473
FUHP01000006
[FUHP] jellyfish metagenome; jellyfish
20840
20767
-
Met
CAT
[ENA]
¢þ
>WENV170596472
FUHP01000006
[FUHP] jellyfish metagenome; jellyfish
20929
20855
-
Met
CAT
[ENA]
¢þ
>WENV170596484
FUHP01000017
[FUHP] jellyfish metagenome; jellyfish
22385
22460
+
Arg
TCT
[ENA]
¢þ
>WENV170596481
FUHP01000016
[FUHP] jellyfish metagenome; jellyfish
22488
22558
+
Gly
TCC
[ENA]
¢þ
>WENV170596482
FUHP01000016
[FUHP] jellyfish metagenome; jellyfish
25636
25710
+
Glu
TTC
[ENA]
¢þ
>WENV170596483
FUHP01000016
[FUHP] jellyfish metagenome; jellyfish
25713
25787
+
Lys
TTT
[ENA]
¢þ
>WENV170596463
FUHP01000003
[FUHP] jellyfish metagenome; jellyfish
31844
31760
-
Ser
TGA
[ENA]
¢þ
>WENV170596470
FUHP01000006
[FUHP] jellyfish metagenome; jellyfish
37779
37855
+
Pro
TGG
[ENA]
¢þ
>WENV170596462
FUHP01000003
[FUHP] jellyfish metagenome; jellyfish
39328
39253
-
Val
GAC
[ENA]
¢þ
>WENV170596478
FUHP01000007
[FUHP] jellyfish metagenome; jellyfish
39786
39713
-
His
GTG
[ENA]
¢þ
>WENV170596471
FUHP01000006
[FUHP] jellyfish metagenome; jellyfish
43009
42926
-
Leu
TAG
[ENA]
¢þ
>WENV170596479
FUHP01000012
[FUHP] jellyfish metagenome; jellyfish
46775
46705
-
Cys
GCA
[ENA]
¢þ
>WENV170596480
FUHP01000014
[FUHP] jellyfish metagenome; jellyfish
51084
51169
+
Leu
CAA
[ENA]
¢þ
>WENV170596467
FUHP01000005
[FUHP] jellyfish metagenome; jellyfish
51796
51883
+
Ser
GCT
[ENA]
¢þ
>WENV170596454
FUHP01000001
[FUHP] jellyfish metagenome; jellyfish
64870
64943
+
Phe
GAA
[ENA]
¢þ
>WENV170596466
FUHP01000004
[FUHP] jellyfish metagenome; jellyfish
76316
76243
-
Asn
GTT
[ENA]
¢þ
>WENV170596477
FUHP01000007
[FUHP] jellyfish metagenome; jellyfish
80426
80351
-
Asp
GTC
[ENA]
¢þ
>WENV170596476
FUHP01000007
[FUHP] jellyfish metagenome; jellyfish
80509
80435
-
Val
TAC
[ENA]
¢þ
>WENV170596455
FUHP01000001
[FUHP] jellyfish metagenome; jellyfish
85815
85904
+
Ser
GGA
[ENA]
¢þ
>WENV170596474
FUHP01000007
[FUHP] jellyfish metagenome; jellyfish
87704
87778
+
Thr
TGT
[ENA]
¢þ
>WENV170596475
FUHP01000007
[FUHP] jellyfish metagenome; jellyfish
87854
87935
+
Tyr
GTA
[ENA]
¢þ
>WENV170596468
FUHP01000005
[FUHP] jellyfish metagenome; jellyfish
109530
109604
+
Ala
GGC
[ENA]
¢þ
>WENV170596469
FUHP01000005
[FUHP] jellyfish metagenome; jellyfish
117933
117857
-
Pro
GGG
[ENA]
¢þ
>WENV170596458
FUHP01000002
[FUHP] jellyfish metagenome; jellyfish
128199
128283
+
Leu
TAA
[ENA]
¢þ
>WENV170596461
FUHP01000003
[FUHP] jellyfish metagenome; jellyfish
131006
130932
-
Trp
CCA
[ENA]
¢þ
>WENV170596460
FUHP01000003
[FUHP] jellyfish metagenome; jellyfish
132395
132322
-
Thr
GGT
[ENA]
¢þ
>WENV170596465
FUHP01000004
[FUHP] jellyfish metagenome; jellyfish
146155
146081
-
Ile
GAT
[ENA]
¢þ
>WENV170596464
FUHP01000004
[FUHP] jellyfish metagenome; jellyfish
146235
146160
-
Ala
TGC
[ENA]
¢þ
>WENV170596459
FUHP01000003
[FUHP] jellyfish metagenome; jellyfish
147875
147950
+
Met
CAT
[ENA]
¢þ
>WENV170596456
FUHP01000001
[FUHP] jellyfish metagenome; jellyfish
229113
229039
-
Arg
CCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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