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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[LAFI] hot springs metagenome; hot springs water enriched for viruses sample NL10_1401_vDNA_Ovation_1.5g/mL
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170668453
LAFI01000367
[LAFI] hot springs metagenome; hot springs water enriched for viruses sample NL10_1401_vDNA_Ovation_1.5g/mL
79
3
-
Trp
CCA
[ENA]
¢þ
>WENV170668455
LAFI01011388
[LAFI] hot springs metagenome; hot springs water enriched for viruses sample NL10_1401_vDNA_Ovation_1.5g/mL
177
101
-
Arg
GCG
[ENA]
¢þ
>WENV170668458
LAFI01021583
[LAFI] hot springs metagenome; hot springs water enriched for viruses sample NL10_1401_vDNA_Ovation_1.5g/mL
235
159
-
Trp
CCA
[ENA]
¢þ
>WENV170668459
LAFI01025835
[LAFI] hot springs metagenome; hot springs water enriched for viruses sample NL10_1401_vDNA_Ovation_1.5g/mL
288
212
-
Trp
CCA
[ENA]
¢þ
>WENV170668456
LAFI01013386
[LAFI] hot springs metagenome; hot springs water enriched for viruses sample NL10_1401_vDNA_Ovation_1.5g/mL
293
363
+
Gly
GCC
[ENA]
¢þ
>WENV170668457
LAFI01014753
[LAFI] hot springs metagenome; hot springs water enriched for viruses sample NL10_1401_vDNA_Ovation_1.5g/mL
361
285
-
Trp
CCA
[ENA]
¢þ
>WENV170668454
LAFI01002398
[LAFI] hot springs metagenome; hot springs water enriched for viruses sample NL10_1401_vDNA_Ovation_1.5g/mL
672
596
-
Trp
CCA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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