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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[MAVA] viral metagenome; DNA from tracheal sample collected at farm Ketul, Bansal
HIT:
4 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180044256
MAVA01001009
[MAVA] viral metagenome; DNA from tracheal sample collected at farm Ketul, Bansal
243
168
-
Lys
TTT
[ENA]
¢þ
>WENV180044253
MAVA01000160
[MAVA] viral metagenome; DNA from tracheal sample collected at farm Ketul, Bansal
553
478
-
Thr
TGT
[ENA]
¢þ
>WENV180044255
MAVA01000179
[MAVA] viral metagenome; DNA from tracheal sample collected at farm Ketul, Bansal
732
807
+
Ser
TGA
[ENA]
¢þ
>WENV180044254
MAVA01000165
[MAVA] viral metagenome; DNA from tracheal sample collected at farm Ketul, Bansal
1029
956
-
Ala
GGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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