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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[MAVF] viral metagenome; DNA from tracheal sample collected at farm S.K, Petlad
HIT:
5 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180044287
MAVF01001032
[MAVF] viral metagenome; DNA from tracheal sample collected at farm S.K, Petlad
149
74
-
Asp
GTC
[ENA]
¢þ
>WENV180044286
MAVF01000464
[MAVF] viral metagenome; DNA from tracheal sample collected at farm S.K, Petlad
251
323
+
Gln
TTG
[ENA]
¢þ
>WENV180044288
MAVF01001604
[MAVF] viral metagenome; DNA from tracheal sample collected at farm S.K, Petlad
350
275
-
Ser
TGA
[ENA]
¢þ
>WENV180044289
MAVF01002077
[MAVF] viral metagenome; DNA from tracheal sample collected at farm S.K, Petlad
469
393
-
Asp
GTC
[ENA]
¢þ
>WENV180044285
MAVF01000029
[MAVF] viral metagenome; DNA from tracheal sample collected at farm S.K, Petlad
2114
2038
-
Thr
CGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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