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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
HIT:
6 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180044309
MAVI01000252
[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
86
161
+
Ala
GGC
[ENA]
¢þ
>WENV180044313
MAVI01001370
[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
104
181
+
fMet
CAT
[ENA]
¢þ
>WENV180044311
MAVI01000648
[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
121
196
+
Lys
TTT
[ENA]
¢þ
>WENV180044308
MAVI01000033
[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
196
270
+
Thr
TGT
[ENA]
¢þ
>WENV180044312
MAVI01000662
[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
265
339
+
Thr
CGT
[ENA]
¢þ
>WENV180044310
MAVI01000527
[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
332
256
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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