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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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tRNA gene List
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170784662
MCNF01001098
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
62
136
+
Val
TAC
[ENA]
¢þ
>WENV170784625
MCNF01000123
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
73
-1
-
Arg
CCG
[ENA]
¢þ
>WENV170784673
MCNF01001565
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
149
65
-
Leu
GAG
[ENA]
¢þ
>WENV170784663
MCNF01001098
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
163
239
+
Asp
GTC
[ENA]
¢þ
>WENV170784647
MCNF01000365
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
175
100
-
Val
TAC
[ENA]
¢þ
>WENV170784677
MCNF01002200
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
190
265
+
Trp
CCA
[ENA]
¢þ
>WENV170784619
MCNF01000092
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
233
148
-
Leu
GAG
[ENA]
¢þ
>WENV170784678
MCNF01002353
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
288
364
+
Ile
GAT
[ENA]
¢þ
>WENV170784688
MCNF01003083
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
298
223
-
Ala
TGC
[ENA]
¢þ
>WENV170784690
MCNF01003099
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
304
229
-
Glu
TTC
[ENA]
¢þ
>WENV170784652
MCNF01000594
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
328
404
+
Arg
TCT
[ENA]
¢þ
>WENV170784679
MCNF01002353
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
375
450
+
Ala
TGC
[ENA]
¢þ
>WENV170784674
MCNF01001925
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
391
467
+
Pro
TGG
[ENA]
¢þ
>WENV170784687
MCNF01003083
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
410
334
-
Ile
GAT
[ENA]
¢þ
>WENV170784689
MCNF01003099
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
427
352
-
Ala
GGC
[ENA]
¢þ
>WENV170784682
MCNF01002368
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
428
504
+
Pro
GGG
[ENA]
¢þ
>WENV170784686
MCNF01002999
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
493
567
+
Arg
CCG
[ENA]
¢þ
>WENV170784675
MCNF01001925
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
507
583
+
Arg
TCT
[ENA]
¢þ
>WENV170784671
MCNF01001490
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
532
621
+
Ser
TGA
[ENA]
¢þ
>WENV170784672
MCNF01001536
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
620
696
+
Arg
CCG
[ENA]
¢þ
>WENV170784683
MCNF01002404
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
627
553
-
Arg
TCT
[ENA]
¢þ
>WENV170784684
MCNF01002446
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
630
716
+
Leu
CAG
[ENA]
¢þ
>WENV170784685
MCNF01002786
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
642
716
+
Val
CAC
[ENA]
¢þ
>WENV170784635
MCNF01000168
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
708
633
-
Asn
GTT
[ENA]
¢þ
>WENV170784669
MCNF01001432
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
718
644
-
Gln
CTG
[ENA]
¢þ
>WENV170784681
MCNF01002365
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
729
653
-
Ile
GAT
[ENA]
¢þ
>WENV170784648
MCNF01000391
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
785
710
-
Asn
GTT
[ENA]
¢þ
>WENV170784611
MCNF01000013
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
792
708
-
Leu
TAG
[ENA]
¢þ
>WENV170784639
MCNF01000224
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
795
720
-
Thr
TGT
[ENA]
¢þ
>WENV170784650
MCNF01000482
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
821
745
-
Pro
TGG
[ENA]
¢þ
>WENV170784654
MCNF01000626
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
832
907
+
His
GTG
[ENA]
¢þ
>WENV170784680
MCNF01002365
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
834
759
-
Ala
TGC
[ENA]
¢þ
>WENV170784668
MCNF01001432
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
850
774
-
Met
CAT
[ENA]
¢þ
>WENV170784610
MCNF01000013
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
926
851
-
His
GTG
[ENA]
¢þ
>WENV170784659
MCNF01000793
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
932
1006
+
Val
CAC
[ENA]
¢þ
>WENV170784661
MCNF01001091
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
987
900
-
Ser
TGA
[ENA]
¢þ
>WENV170784609
MCNF01000013
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
1035
959
-
Arg
TCT
[ENA]
¢þ
>WENV170784676
MCNF01002023
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
1112
1204
+
Ser
GGA
[ENA]
¢þ
>WENV170784649
MCNF01000447
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
1339
1423
+
Leu
GAG
[ENA]
¢þ
>WENV170784655
MCNF01000632
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
1400
1475
+
Ala
CGC
[ENA]
¢þ
>WENV170784620
MCNF01000094
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
1511
1595
+
Leu
CAA
[ENA]
¢þ
>WENV170784621
MCNF01000096
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
1678
1754
+
Val
GAC
[ENA]
¢þ
>WENV170784670
MCNF01001444
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
1840
1765
-
Thr
CGT
[ENA]
¢þ
>WENV170784629
MCNF01000141
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
1938
2014
+
Val
GAC
[ENA]
¢þ
>WENV170784651
MCNF01000579
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
2071
2163
+
Ser
GCT
[ENA]
¢þ
>WENV170784634
MCNF01000168
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
2138
2063
-
Thr
TGT
[ENA]
¢þ
>WENV170784665
MCNF01001153
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
2154
2238
+
Tyr
GTA
[ENA]
¢þ
>WENV170784666
MCNF01001153
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
2263
2336
+
Gly
TCC
[ENA]
¢þ
>WENV170784664
MCNF01001108
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
2357
2282
-
Thr
CGT
[ENA]
¢þ
>WENV170784667
MCNF01001153
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
2363
2438
+
Thr
GGT
[ENA]
¢þ
>WENV170784633
MCNF01000160
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
2705
2779
+
Arg
CCT
[ENA]
¢þ
>WENV170784658
MCNF01000720
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
2766
2691
-
Phe
GAA
[ENA]
¢þ
>WENV170784656
MCNF01000665
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
3193
3117
-
Asn
GTT
[ENA]
¢þ
>WENV170784660
MCNF01000797
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
3304
3231
-
Gly
TCC
[ENA]
¢þ
>WENV170784657
MCNF01000697
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
3946
3857
-
Ser
TGA
[ENA]
¢þ
>WENV170784638
MCNF01000210
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
4227
4151
-
Met
CAT
[ENA]
¢þ
>WENV170784653
MCNF01000605
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
5234
5148
-
Leu
TAG
[ENA]
¢þ
>WENV170784636
MCNF01000171
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
5450
5526
+
Pro
CGG
[ENA]
¢þ
>WENV170784641
MCNF01000234
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
6444
6519
+
Lys
TTT
[ENA]
¢þ
>WENV170784630
MCNF01000144
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
7636
7726
+
Ser
CGA
[ENA]
¢þ
>WENV170784631
MCNF01000152
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
7643
7718
+
Ala
CGC
[ENA]
¢þ
>WENV170784646
MCNF01000363
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
8062
7987
-
Val
TAC
[ENA]
¢þ
>WENV170784627
MCNF01000127
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
8117
8044
-
Cys
GCA
[ENA]
¢þ
>WENV170784626
MCNF01000127
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
8248
8173
-
Gly
GCC
[ENA]
¢þ
>WENV170784616
MCNF01000035
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
8303
8227
-
Met
CAT
[ENA]
¢þ
>WENV170784624
MCNF01000119
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
8569
8480
-
Ser
CGA
[ENA]
¢þ
>WENV170784645
MCNF01000355
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
8600
8687
+
Ser
TGA
[ENA]
¢þ
>WENV170784644
MCNF01000348
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
10157
10084
-
Cys
GCA
[ENA]
¢þ
>WENV170784628
MCNF01000137
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
10291
10215
-
Pro
GGG
[ENA]
¢þ
>WENV170784640
MCNF01000233
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
12358
12434
+
Gln
TTG
[ENA]
¢þ
>WENV170784643
MCNF01000285
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
12747
12822
+
Asn
GTT
[ENA]
¢þ
>WENV170784637
MCNF01000208
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
14953
14877
-
Arg
CCT
[ENA]
¢þ
>WENV170784642
MCNF01000236
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
15396
15321
-
Trp
CCA
[ENA]
¢þ
>WENV170784623
MCNF01000114
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
19296
19206
-
Ser
GGA
[ENA]
¢þ
>WENV170784632
MCNF01000156
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
19693
19768
+
Lys
CTT
[ENA]
¢þ
>WENV170784613
MCNF01000018
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
24642
24567
-
Phe
GAA
[ENA]
¢þ
>WENV170784622
MCNF01000096
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
32895
32971
+
Pro
GGG
[ENA]
¢þ
>WENV170784618
MCNF01000056
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
46450
46377
-
Gly
CCC
[ENA]
¢þ
>WENV170784617
MCNF01000042
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
49768
49695
-
Gly
CCC
[ENA]
¢þ
>WENV170784614
MCNF01000022
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
68443
68357
-
Leu
TAA
[ENA]
¢þ
>WENV170784615
MCNF01000029
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
71913
71997
+
Leu
CAA
[ENA]
¢þ
>WENV170784612
MCNF01000014
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
76184
76273
+
Ser
GGA
[ENA]
¢þ
>WENV170784608
MCNF01000006
[MCNF] bioreactor metagenome; arboretum soil enriched with benzalkonium chloride
127985
128075
+
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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