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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[MJUM] soil metagenome; viral particles from soil sample SP
HIT:
139 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170956138
MJUM01014538
[MJUM] soil metagenome; viral particles from soil sample SP
12
83
+
Ala
TGC
[ENA]
¢þ
>WENV170956115
MJUM01009972
[MJUM] soil metagenome; viral particles from soil sample SP
16
90
+
Ala
TGC
[ENA]
¢þ
>WENV170956061
MJUM01003765
[MJUM] soil metagenome; viral particles from soil sample SP
42
127
+
Leu
TAA
[ENA]
¢þ
>WENV170956163
MJUM01020540
[MJUM] soil metagenome; viral particles from soil sample SP
47
120
+
Ala
TGC
[ENA]
¢þ
>WENV170956144
MJUM01015639
[MJUM] soil metagenome; viral particles from soil sample SP
52
126
+
Glu
TTC
[ENA]
¢þ
>WENV170956096
MJUM01007052
[MJUM] soil metagenome; viral particles from soil sample SP
53
134
+
Leu
TAG
[ENA]
¢þ
>WENV170956156
MJUM01018602
[MJUM] soil metagenome; viral particles from soil sample SP
61
148
+
Ser
GCT
[ENA]
¢þ
>WENV170956078
MJUM01005761
[MJUM] soil metagenome; viral particles from soil sample SP
65
139
+
Arg
ACG
[ENA]
¢þ
>WENV170956112
MJUM01009569
[MJUM] soil metagenome; viral particles from soil sample SP
76
158
+
Leu
GAG
[ENA]
¢þ
>WENV170956047
MJUM01002370
[MJUM] soil metagenome; viral particles from soil sample SP
83
159
+
Ile
GAT
[ENA]
¢þ
>WENV170956105
MJUM01008235
[MJUM] soil metagenome; viral particles from soil sample SP
98
24
-
Thr
CGT
[ENA]
¢þ
>WENV170956093
MJUM01006547
[MJUM] soil metagenome; viral particles from soil sample SP
102
177
+
Glu
TTC
[ENA]
¢þ
>WENV170956065
MJUM01003783
[MJUM] soil metagenome; viral particles from soil sample SP
107
32
-
His
GTG
[ENA]
¢þ
>WENV170956057
MJUM01002769
[MJUM] soil metagenome; viral particles from soil sample SP
107
190
+
Leu
TAA
[ENA]
¢þ
>WENV170956131
MJUM01013307
[MJUM] soil metagenome; viral particles from soil sample SP
110
193
+
Leu
TAA
[ENA]
¢þ
>WENV170956043
MJUM01001780
[MJUM] soil metagenome; viral particles from soil sample SP
114
188
+
Val
TAC
[ENA]
¢þ
>WENV170956162
MJUM01020448
[MJUM] soil metagenome; viral particles from soil sample SP
121
195
+
Ala
GGC
[ENA]
¢þ
>WENV170956122
MJUM01011188
[MJUM] soil metagenome; viral particles from soil sample SP
122
35
-
Leu
TAG
[ENA]
¢þ
>WENV170956150
MJUM01016272
[MJUM] soil metagenome; viral particles from soil sample SP
124
208
+
Ala
TGC
[ENA]
¢þ
>WENV170956161
MJUM01020167
[MJUM] soil metagenome; viral particles from soil sample SP
126
199
+
Trp
CCA
[ENA]
¢þ
>WENV170956120
MJUM01010696
[MJUM] soil metagenome; viral particles from soil sample SP
127
198
+
Gln
CTG
[ENA]
¢þ
>WENV170956128
MJUM01012536
[MJUM] soil metagenome; viral particles from soil sample SP
130
205
+
Lys
TTT
[ENA]
¢þ
>WENV170956160
MJUM01019974
[MJUM] soil metagenome; viral particles from soil sample SP
132
208
+
Lys
TTT
[ENA]
¢þ
>WENV170956039
MJUM01001724
[MJUM] soil metagenome; viral particles from soil sample SP
140
216
+
Met
CAT
[ENA]
¢þ
>WENV170956140
MJUM01015080
[MJUM] soil metagenome; viral particles from soil sample SP
146
70
-
Met
CAT
[ENA]
¢þ
>WENV170956097
MJUM01007158
[MJUM] soil metagenome; viral particles from soil sample SP
146
219
+
Asp
GTC
[ENA]
¢þ
>WENV170956034
MJUM01000976
[MJUM] soil metagenome; viral particles from soil sample SP
148
74
-
Arg
TCT
[ENA]
¢þ
>WENV170956117
MJUM01010344
[MJUM] soil metagenome; viral particles from soil sample SP
148
220
+
Arg
GCG
[ENA]
¢þ
>WENV170956037
MJUM01001640
[MJUM] soil metagenome; viral particles from soil sample SP
152
226
+
Leu
TAA
[ENA]
¢þ
>WENV170956092
MJUM01006464
[MJUM] soil metagenome; viral particles from soil sample SP
153
81
-
Lys
TTT
[ENA]
¢þ
>WENV170956165
MJUM01021085
[MJUM] soil metagenome; viral particles from soil sample SP
154
79
-
Pro
TGG
[ENA]
¢þ
>WENV170956143
MJUM01015523
[MJUM] soil metagenome; viral particles from soil sample SP
155
228
+
Gln
CTG
[ENA]
¢þ
>WENV170956167
MJUM01021138
[MJUM] soil metagenome; viral particles from soil sample SP
156
82
-
Arg
TCT
[ENA]
¢þ
>WENV170956090
MJUM01006399
[MJUM] soil metagenome; viral particles from soil sample SP
156
83
-
Thr
GGT
[ENA]
¢þ
>WENV170956157
MJUM01018602
[MJUM] soil metagenome; viral particles from soil sample SP
158
244
+
Ser
GGA
[ENA]
¢þ
>WENV170956094
MJUM01006767
[MJUM] soil metagenome; viral particles from soil sample SP
161
89
-
Ala
TGC
[ENA]
¢þ
>WENV170956166
MJUM01021135
[MJUM] soil metagenome; viral particles from soil sample SP
166
240
+
Met
CAT
[ENA]
¢þ
>WENV170956145
MJUM01015639
[MJUM] soil metagenome; viral particles from soil sample SP
167
239
+
Asn
GTT
[ENA]
¢þ
>WENV170956126
MJUM01011856
[MJUM] soil metagenome; viral particles from soil sample SP
170
257
+
Leu
GAG
[ENA]
¢þ
>WENV170956101
MJUM01008091
[MJUM] soil metagenome; viral particles from soil sample SP
172
97
-
Gln
TTG
[ENA]
¢þ
>WENV170956066
MJUM01004324
[MJUM] soil metagenome; viral particles from soil sample SP
175
248
+
Lys
CTT
[ENA]
¢þ
>WENV170956045
MJUM01002074
[MJUM] soil metagenome; viral particles from soil sample SP
177
93
-
Leu
CAA
[ENA]
¢þ
>WENV170956146
MJUM01015709
[MJUM] soil metagenome; viral particles from soil sample SP
177
103
-
Glu
CTC
[ENA]
¢þ
>WENV170956110
MJUM01009118
[MJUM] soil metagenome; viral particles from soil sample SP
181
96
-
Asn
GTT
[ENA]
¢þ
>WENV170956159
MJUM01019840
[MJUM] soil metagenome; viral particles from soil sample SP
181
256
+
Leu
TAA
[ENA]
¢þ
>WENV170956104
MJUM01008235
[MJUM] soil metagenome; viral particles from soil sample SP
184
111
-
Ala
CGC
[ENA]
¢þ
>WENV170956100
MJUM01007956
[MJUM] soil metagenome; viral particles from soil sample SP
185
110
-
Thr
TGT
[ENA]
¢þ
>WENV170956077
MJUM01005573
[MJUM] soil metagenome; viral particles from soil sample SP
189
102
-
Ser
GCT
[ENA]
¢þ
>WENV170956058
MJUM01002801
[MJUM] soil metagenome; viral particles from soil sample SP
189
262
+
Gln
TTG
[ENA]
¢þ
>WENV170956042
MJUM01001752
[MJUM] soil metagenome; viral particles from soil sample SP
191
266
+
Ala
TGC
[ENA]
¢þ
>WENV170956137
MJUM01013834
[MJUM] soil metagenome; viral particles from soil sample SP
192
111
-
Leu
TAG
[ENA]
¢þ
>WENV170956153
MJUM01017495
[MJUM] soil metagenome; viral particles from soil sample SP
197
123
-
Gly
GCC
[ENA]
¢þ
>WENV170956033
MJUM01000527
[MJUM] soil metagenome; viral particles from soil sample SP
200
273
+
Lys
TTT
[ENA]
¢þ
>WENV170956044
MJUM01001780
[MJUM] soil metagenome; viral particles from soil sample SP
200
287
+
Leu
TAG
[ENA]
¢þ
>WENV170956070
MJUM01004958
[MJUM] soil metagenome; viral particles from soil sample SP
202
130
-
Trp
CCA
[ENA]
¢þ
>WENV170956168
MJUM01021244
[MJUM] soil metagenome; viral particles from soil sample SP
208
134
-
Gly
TCC
[ENA]
¢þ
>WENV170956136
MJUM01013809
[MJUM] soil metagenome; viral particles from soil sample SP
211
135
-
Met
CAT
[ENA]
¢þ
>WENV170956074
MJUM01005491
[MJUM] soil metagenome; viral particles from soil sample SP
211
294
+
Leu
TAA
[ENA]
¢þ
>WENV170956155
MJUM01018072
[MJUM] soil metagenome; viral particles from soil sample SP
212
139
-
Ile
TAT
[ENA]
¢þ
>WENV170956129
MJUM01012536
[MJUM] soil metagenome; viral particles from soil sample SP
212
284
+
Thr
GGT
[ENA]
¢þ
>WENV170956035
MJUM01000981
[MJUM] soil metagenome; viral particles from soil sample SP
213
139
-
Pro
TGG
[ENA]
¢þ
>WENV170956149
MJUM01016142
[MJUM] soil metagenome; viral particles from soil sample SP
215
143
-
Ile
GAT
[ENA]
¢þ
>WENV170956119
MJUM01010582
[MJUM] soil metagenome; viral particles from soil sample SP
217
141
-
Leu
TAA
[ENA]
¢þ
>WENV170956073
MJUM01005409
[MJUM] soil metagenome; viral particles from soil sample SP
222
297
+
Met
CAT
[ENA]
¢þ
>WENV170956063
MJUM01003783
[MJUM] soil metagenome; viral particles from soil sample SP
223
298
+
His
GTG
[ENA]
¢þ
>WENV170956134
MJUM01013526
[MJUM] soil metagenome; viral particles from soil sample SP
227
154
-
Arg
CCT
[ENA]
¢þ
>WENV170956142
MJUM01015494
[MJUM] soil metagenome; viral particles from soil sample SP
228
155
-
Met
CAT
[ENA]
¢þ
>WENV170956127
MJUM01012247
[MJUM] soil metagenome; viral particles from soil sample SP
228
312
+
Leu
TAA
[ENA]
¢þ
>WENV170956055
MJUM01002669
[MJUM] soil metagenome; viral particles from soil sample SP
230
153
-
Leu
TAA
[ENA]
¢þ
>WENV170956052
MJUM01002522
[MJUM] soil metagenome; viral particles from soil sample SP
234
159
-
Lys
TTT
[ENA]
¢þ
>WENV170956164
MJUM01020843
[MJUM] soil metagenome; viral particles from soil sample SP
234
163
-
Thr
TGT
[ENA]
¢þ
>WENV170956040
MJUM01001745
[MJUM] soil metagenome; viral particles from soil sample SP
236
311
+
Trp
CCA
[ENA]
¢þ
>WENV170956087
MJUM01006137
[MJUM] soil metagenome; viral particles from soil sample SP
248
172
-
Glu
TTC
[ENA]
¢þ
>WENV170956135
MJUM01013675
[MJUM] soil metagenome; viral particles from soil sample SP
252
334
+
Tyr
GTA
[ENA]
¢þ
>WENV170956054
MJUM01002668
[MJUM] soil metagenome; viral particles from soil sample SP
263
187
-
Leu
TAA
[ENA]
¢þ
>WENV170956103
MJUM01008235
[MJUM] soil metagenome; viral particles from soil sample SP
263
188
-
Val
GAC
[ENA]
¢þ
>WENV170956113
MJUM01009620
[MJUM] soil metagenome; viral particles from soil sample SP
263
336
+
Arg
TCT
[ENA]
¢þ
>WENV170956133
MJUM01013505
[MJUM] soil metagenome; viral particles from soil sample SP
264
349
+
Leu
TAG
[ENA]
¢þ
>WENV170956051
MJUM01002399
[MJUM] soil metagenome; viral particles from soil sample SP
269
194
-
Thr
TGT
[ENA]
¢þ
>WENV170956132
MJUM01013411
[MJUM] soil metagenome; viral particles from soil sample SP
269
354
+
Leu
CAG
[ENA]
¢þ
>WENV170956121
MJUM01011015
[MJUM] soil metagenome; viral particles from soil sample SP
276
349
+
Met
CAT
[ENA]
¢þ
>WENV170956062
MJUM01003768
[MJUM] soil metagenome; viral particles from soil sample SP
284
359
+
Pro
GGG
[ENA]
¢þ
>WENV170956154
MJUM01018072
[MJUM] soil metagenome; viral particles from soil sample SP
292
220
-
Ile
GAT
[ENA]
¢þ
>WENV170956038
MJUM01001710
[MJUM] soil metagenome; viral particles from soil sample SP
292
364
+
Arg
CCT
[ENA]
¢þ
>WENV170956060
MJUM01003743
[MJUM] soil metagenome; viral particles from soil sample SP
297
224
-
Arg
TCT
[ENA]
¢þ
>WENV170956141
MJUM01015173
[MJUM] soil metagenome; viral particles from soil sample SP
298
224
-
Glu
TTC
[ENA]
¢þ
>WENV170956147
MJUM01016126
[MJUM] soil metagenome; viral particles from soil sample SP
300
227
-
Arg
TCT
[ENA]
¢þ
>WENV170956064
MJUM01003783
[MJUM] soil metagenome; viral particles from soil sample SP
302
379
+
Ile
TAT
[ENA]
¢þ
>WENV170956130
MJUM01012763
[MJUM] soil metagenome; viral particles from soil sample SP
308
221
-
Ser
GCT
[ENA]
¢þ
>WENV170956118
MJUM01010516
[MJUM] soil metagenome; viral particles from soil sample SP
309
384
+
Cys
GCA
[ENA]
¢þ
>WENV170956091
MJUM01006464
[MJUM] soil metagenome; viral particles from soil sample SP
316
241
-
Gln
TTG
[ENA]
¢þ
>WENV170956083
MJUM01005952
[MJUM] soil metagenome; viral particles from soil sample SP
317
244
-
Cys
GCA
[ENA]
¢þ
>WENV170956079
MJUM01005887
[MJUM] soil metagenome; viral particles from soil sample SP
318
246
-
Ala
TGC
[ENA]
¢þ
>WENV170956036
MJUM01001128
[MJUM] soil metagenome; viral particles from soil sample SP
320
245
-
Trp
CCA
[ENA]
¢þ
>WENV170956075
MJUM01005552
[MJUM] soil metagenome; viral particles from soil sample SP
322
395
+
Thr
GGT
[ENA]
¢þ
>WENV170956151
MJUM01017019
[MJUM] soil metagenome; viral particles from soil sample SP
322
397
+
Thr
CGT
[ENA]
¢þ
>WENV170956123
MJUM01011218
[MJUM] soil metagenome; viral particles from soil sample SP
325
253
-
Thr
CGT
[ENA]
¢þ
>WENV170956099
MJUM01007550
[MJUM] soil metagenome; viral particles from soil sample SP
335
408
+
His
GTG
[ENA]
¢þ
>WENV170956076
MJUM01005573
[MJUM] soil metagenome; viral particles from soil sample SP
341
267
-
Asn
GTT
[ENA]
¢þ
>WENV170956084
MJUM01005969
[MJUM] soil metagenome; viral particles from soil sample SP
346
270
-
Ile
GAT
[ENA]
¢þ
>WENV170956102
MJUM01008235
[MJUM] soil metagenome; viral particles from soil sample SP
349
265
-
Tyr
GTA
[ENA]
¢þ
>WENV170956095
MJUM01006807
[MJUM] soil metagenome; viral particles from soil sample SP
349
278
-
Lys
TTT
[ENA]
¢þ
>WENV170956152
MJUM01017286
[MJUM] soil metagenome; viral particles from soil sample SP
350
259
-
Ser
GCT
[ENA]
¢þ
>WENV170956098
MJUM01007191
[MJUM] soil metagenome; viral particles from soil sample SP
352
276
-
Arg
TCT
[ENA]
¢þ
>WENV170956053
MJUM01002649
[MJUM] soil metagenome; viral particles from soil sample SP
354
282
-
Asn
GTT
[ENA]
¢þ
>WENV170956111
MJUM01009351
[MJUM] soil metagenome; viral particles from soil sample SP
354
283
-
Gly
TCC
[ENA]
¢þ
>WENV170956139
MJUM01014718
[MJUM] soil metagenome; viral particles from soil sample SP
362
290
-
Gly
TCC
[ENA]
¢þ
>WENV170956089
MJUM01006390
[MJUM] soil metagenome; viral particles from soil sample SP
369
293
-
Pro
TGG
[ENA]
¢þ
>WENV170956072
MJUM01005314
[MJUM] soil metagenome; viral particles from soil sample SP
375
301
-
Arg
TCG
[ENA]
¢þ
>WENV170956085
MJUM01006093
[MJUM] soil metagenome; viral particles from soil sample SP
383
468
+
Lys
TTT
[ENA]
¢þ
>WENV170956086
MJUM01006137
[MJUM] soil metagenome; viral particles from soil sample SP
392
319
-
Glu
CTC
[ENA]
¢þ
>WENV170956041
MJUM01001745
[MJUM] soil metagenome; viral particles from soil sample SP
394
468
+
Asp
GTC
[ENA]
¢þ
>WENV170956106
MJUM01008399
[MJUM] soil metagenome; viral particles from soil sample SP
398
326
-
Met
CAT
[ENA]
¢þ
>WENV170956050
MJUM01002399
[MJUM] soil metagenome; viral particles from soil sample SP
416
343
-
Phe
GAA
[ENA]
¢þ
>WENV170956125
MJUM01011788
[MJUM] soil metagenome; viral particles from soil sample SP
427
356
-
Glu
CTC
[ENA]
¢þ
>WENV170956114
MJUM01009717
[MJUM] soil metagenome; viral particles from soil sample SP
454
528
+
Glu
TTC
[ENA]
¢þ
>WENV170956109
MJUM01009024
[MJUM] soil metagenome; viral particles from soil sample SP
461
386
-
Val
TAC
[ENA]
¢þ
>WENV170956056
MJUM01002691
[MJUM] soil metagenome; viral particles from soil sample SP
463
540
+
Thr
TGT
[ENA]
¢þ
>WENV170956148
MJUM01016142
[MJUM] soil metagenome; viral particles from soil sample SP
477
402
-
Pro
TGG
[ENA]
¢þ
>WENV170956088
MJUM01006390
[MJUM] soil metagenome; viral particles from soil sample SP
489
418
-
Pro
TGG
[ENA]
¢þ
>WENV170956082
MJUM01005952
[MJUM] soil metagenome; viral particles from soil sample SP
493
407
-
Leu
TAG
[ENA]
¢þ
>WENV170956059
MJUM01003074
[MJUM] soil metagenome; viral particles from soil sample SP
513
442
-
Val
TAC
[ENA]
¢þ
>WENV170956071
MJUM01005314
[MJUM] soil metagenome; viral particles from soil sample SP
526
453
-
Ala
TGC
[ENA]
¢þ
>WENV170956046
MJUM01002093
[MJUM] soil metagenome; viral particles from soil sample SP
563
488
-
Trp
CCA
[ENA]
¢þ
>WENV170956124
MJUM01011271
[MJUM] soil metagenome; viral particles from soil sample SP
567
496
-
Glu
TTC
[ENA]
¢þ
>WENV170956081
MJUM01005952
[MJUM] soil metagenome; viral particles from soil sample SP
582
495
-
Ser
GCT
[ENA]
¢þ
>WENV170956158
MJUM01019770
[MJUM] soil metagenome; viral particles from soil sample SP
584
668
+
Leu
TAA
[ENA]
¢þ
>WENV170956116
MJUM01010079
[MJUM] soil metagenome; viral particles from soil sample SP
596
520
-
Val
TAC
[ENA]
¢þ
>WENV170956108
MJUM01009024
[MJUM] soil metagenome; viral particles from soil sample SP
619
547
-
Glu
CTC
[ENA]
¢þ
>WENV170956080
MJUM01005952
[MJUM] soil metagenome; viral particles from soil sample SP
657
586
-
Asn
GTT
[ENA]
¢þ
>WENV170956069
MJUM01004793
[MJUM] soil metagenome; viral particles from soil sample SP
695
606
-
Ser
TGA
[ENA]
¢þ
>WENV170956049
MJUM01002399
[MJUM] soil metagenome; viral particles from soil sample SP
713
637
-
Met
CAT
[ENA]
¢þ
>WENV170956048
MJUM01002399
[MJUM] soil metagenome; viral particles from soil sample SP
788
715
-
Lys
TTT
[ENA]
¢þ
>WENV170956067
MJUM01004667
[MJUM] soil metagenome; viral particles from soil sample SP
845
920
+
Leu
TAA
[ENA]
¢þ
>WENV170956107
MJUM01008698
[MJUM] soil metagenome; viral particles from soil sample SP
1021
1097
+
Leu
TAA
[ENA]
¢þ
>WENV170956068
MJUM01004667
[MJUM] soil metagenome; viral particles from soil sample SP
1103
1176
+
Lys
TTT
[ENA]
¢þ
>WENV170956032
MJUM01000290
[MJUM] soil metagenome; viral particles from soil sample SP
1306
1231
-
Lys
TTT
[ENA]
¢þ
>WENV170956030
MJUM01000035
[MJUM] soil metagenome; viral particles from soil sample SP
1400
1322
-
Lys
TTT
[ENA]
¢þ
>WENV170956031
MJUM01000042
[MJUM] soil metagenome; viral particles from soil sample SP
1533
1459
-
Met
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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