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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[MJUO] soil metagenome; viral particles from soil sample MTG
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170956402
MJUO01000044
[MJUO] soil metagenome; viral particles from soil sample MTG
112
41
-
Lys
CTT
[ENA]
¢þ
>WENV170956408
MJUO01000651
[MJUO] soil metagenome; viral particles from soil sample MTG
130
205
+
Phe
GAA
[ENA]
¢þ
>WENV170956414
MJUO01000841
[MJUO] soil metagenome; viral particles from soil sample MTG
168
252
+
Leu
TAA
[ENA]
¢þ
>WENV170956407
MJUO01000648
[MJUO] soil metagenome; viral particles from soil sample MTG
177
104
-
Met
CAT
[ENA]
¢þ
>WENV170956401
MJUO01000044
[MJUO] soil metagenome; viral particles from soil sample MTG
190
116
-
Arg
GCG
[ENA]
¢þ
>WENV170956413
MJUO01000780
[MJUO] soil metagenome; viral particles from soil sample MTG
200
270
+
Cys
GCA
[ENA]
¢þ
>WENV170956412
MJUO01000745
[MJUO] soil metagenome; viral particles from soil sample MTG
208
135
-
Val
GAC
[ENA]
¢þ
>WENV170956409
MJUO01000651
[MJUO] soil metagenome; viral particles from soil sample MTG
262
334
+
Ala
TGC
[ENA]
¢þ
>WENV170956423
MJUO01001737
[MJUO] soil metagenome; viral particles from soil sample MTG
274
347
+
Pro
TGG
[ENA]
¢þ
>WENV170956422
MJUO01001623
[MJUO] soil metagenome; viral particles from soil sample MTG
305
389
+
Leu
TAG
[ENA]
¢þ
>WENV170956405
MJUO01000452
[MJUO] soil metagenome; viral particles from soil sample MTG
320
244
-
Met
CAT
[ENA]
¢þ
>WENV170956416
MJUO01001146
[MJUO] soil metagenome; viral particles from soil sample MTG
331
407
+
Met
CAT
[ENA]
¢þ
>WENV170956420
MJUO01001550
[MJUO] soil metagenome; viral particles from soil sample MTG
357
275
-
Tyr
GTA
[ENA]
¢þ
>WENV170956411
MJUO01000745
[MJUO] soil metagenome; viral particles from soil sample MTG
365
292
-
Val
TAC
[ENA]
¢þ
>WENV170956418
MJUO01001373
[MJUO] soil metagenome; viral particles from soil sample MTG
371
442
+
Cys
GCA
[ENA]
¢þ
>WENV170956421
MJUO01001562
[MJUO] soil metagenome; viral particles from soil sample MTG
377
301
-
Pro
GGG
[ENA]
¢þ
>WENV170956415
MJUO01000978
[MJUO] soil metagenome; viral particles from soil sample MTG
419
345
-
Pro
GGG
[ENA]
¢þ
>WENV170956406
MJUO01000648
[MJUO] soil metagenome; viral particles from soil sample MTG
428
354
-
Lys
CTT
[ENA]
¢þ
>WENV170956404
MJUO01000352
[MJUO] soil metagenome; viral particles from soil sample MTG
430
342
-
Ser
GCT
[ENA]
¢þ
>WENV170956417
MJUO01001218
[MJUO] soil metagenome; viral particles from soil sample MTG
452
528
+
Leu
TAA
[ENA]
¢þ
>WENV170956403
MJUO01000352
[MJUO] soil metagenome; viral particles from soil sample MTG
518
445
-
Arg
CCT
[ENA]
¢þ
>WENV170956419
MJUO01001550
[MJUO] soil metagenome; viral particles from soil sample MTG
544
472
-
Trp
CCA
[ENA]
¢þ
>WENV170956410
MJUO01000745
[MJUO] soil metagenome; viral particles from soil sample MTG
664
593
-
Thr
TGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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