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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[MJUR] soil metagenome; viral particles from soil sample MTG22
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170957248
MJUR01003959
[MJUR] soil metagenome; viral particles from soil sample MTG22
17
91
+
Trp
CCA
[ENA]
¢þ
>WENV170957256
MJUR01005135
[MJUR] soil metagenome; viral particles from soil sample MTG22
20
95
+
Ala
TGC
[ENA]
¢þ
>WENV170957260
MJUR01005867
[MJUR] soil metagenome; viral particles from soil sample MTG22
63
138
+
Leu
TAA
[ENA]
¢þ
>WENV170957250
MJUR01004486
[MJUR] soil metagenome; viral particles from soil sample MTG22
141
65
-
Lys
TTT
[ENA]
¢þ
>WENV170957257
MJUR01005223
[MJUR] soil metagenome; viral particles from soil sample MTG22
143
216
+
Trp
CCA
[ENA]
¢þ
>WENV170957238
MJUR01001168
[MJUR] soil metagenome; viral particles from soil sample MTG22
162
85
-
Leu
TAA
[ENA]
¢þ
>WENV170957245
MJUR01003096
[MJUR] soil metagenome; viral particles from soil sample MTG22
191
265
+
Gln
TTG
[ENA]
¢þ
>WENV170957252
MJUR01004875
[MJUR] soil metagenome; viral particles from soil sample MTG22
195
123
-
Asn
GTT
[ENA]
¢þ
>WENV170957261
MJUR01006078
[MJUR] soil metagenome; viral particles from soil sample MTG22
198
272
+
Thr
GGT
[ENA]
¢þ
>WENV170957242
MJUR01002301
[MJUR] soil metagenome; viral particles from soil sample MTG22
226
150
-
Arg
ACG
[ENA]
¢þ
>WENV170957246
MJUR01003723
[MJUR] soil metagenome; viral particles from soil sample MTG22
241
167
-
Arg
TCT
[ENA]
¢þ
>WENV170957236
MJUR01000872
[MJUR] soil metagenome; viral particles from soil sample MTG22
249
162
-
Leu
TAA
[ENA]
¢þ
>WENV170957259
MJUR01005430
[MJUR] soil metagenome; viral particles from soil sample MTG22
257
181
-
Met
CAT
[ENA]
¢þ
>WENV170957237
MJUR01001008
[MJUR] soil metagenome; viral particles from soil sample MTG22
274
347
+
Lys
TTT
[ENA]
¢þ
>WENV170957247
MJUR01003893
[MJUR] soil metagenome; viral particles from soil sample MTG22
286
358
+
Arg
TCT
[ENA]
¢þ
>WENV170957235
MJUR01000831
[MJUR] soil metagenome; viral particles from soil sample MTG22
299
212
-
Leu
TAA
[ENA]
¢þ
>WENV170957232
MJUR01000459
[MJUR] soil metagenome; viral particles from soil sample MTG22
315
228
-
Leu
TAA
[ENA]
¢þ
>WENV170957240
MJUR01002037
[MJUR] soil metagenome; viral particles from soil sample MTG22
332
408
+
Arg
TCT
[ENA]
¢þ
>WENV170957244
MJUR01002647
[MJUR] soil metagenome; viral particles from soil sample MTG22
335
411
+
Lys
CTT
[ENA]
¢þ
>WENV170957258
MJUR01005430
[MJUR] soil metagenome; viral particles from soil sample MTG22
341
266
-
Lys
TTT
[ENA]
¢þ
>WENV170957251
MJUR01004556
[MJUR] soil metagenome; viral particles from soil sample MTG22
351
427
+
Pro
TGG
[ENA]
¢þ
>WENV170957243
MJUR01002469
[MJUR] soil metagenome; viral particles from soil sample MTG22
356
283
-
Phe
GAA
[ENA]
¢þ
>WENV170957234
MJUR01000694
[MJUR] soil metagenome; viral particles from soil sample MTG22
386
463
+
Arg
ACG
[ENA]
¢þ
>WENV170957262
MJUR01006298
[MJUR] soil metagenome; viral particles from soil sample MTG22
400
476
+
Asn
GTT
[ENA]
¢þ
>WENV170957241
MJUR01002068
[MJUR] soil metagenome; viral particles from soil sample MTG22
424
348
-
Lys
TTT
[ENA]
¢þ
>WENV170957231
MJUR01000397
[MJUR] soil metagenome; viral particles from soil sample MTG22
454
378
-
Arg
GCG
[ENA]
¢þ
>WENV170957239
MJUR01001542
[MJUR] soil metagenome; viral particles from soil sample MTG22
594
517
-
Leu
TAA
[ENA]
¢þ
>WENV170957255
MJUR01005122
[MJUR] soil metagenome; viral particles from soil sample MTG22
600
525
-
Glu
TTC
[ENA]
¢þ
>WENV170957249
MJUR01004414
[MJUR] soil metagenome; viral particles from soil sample MTG22
637
713
+
Met
CAT
[ENA]
¢þ
>WENV170957233
MJUR01000495
[MJUR] soil metagenome; viral particles from soil sample MTG22
641
716
+
Lys
TTT
[ENA]
¢þ
>WENV170957254
MJUR01005122
[MJUR] soil metagenome; viral particles from soil sample MTG22
679
605
-
Gly
TCC
[ENA]
¢þ
>WENV170957253
MJUR01005122
[MJUR] soil metagenome; viral particles from soil sample MTG22
757
684
-
Met
CAT
[ENA]
¢þ
>WENV170957230
MJUR01000384
[MJUR] soil metagenome; viral particles from soil sample MTG22
3029
2944
-
Leu
TAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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