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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170957271
MKFH01000258
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
81
6
-
Lys
CTT
[ENA]
¢þ
>WENV170957278
MKFH01000711
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
118
192
+
Ile
TAT
[ENA]
¢þ
>WENV170957291
MKFH01001347
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
162
246
+
Leu
GAG
[ENA]
¢þ
>WENV170957281
MKFH01000732
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
175
99
-
His
GTG
[ENA]
¢þ
>WENV170957272
MKFH01000315
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
183
255
+
Gly
TCC
[ENA]
¢þ
>WENV170957263
MKFH01000090
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
193
282
+
Ser
GGA
[ENA]
¢þ
>WENV170957290
MKFH01001312
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
216
145
-
Pro
CGG
[ENA]
¢þ
>WENV170957295
MKFH01001548
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
245
321
+
Ile
GAT
[ENA]
¢þ
>WENV170957298
MKFH01001767
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
269
343
+
Asn
GTT
[ENA]
¢þ
>WENV170957294
MKFH01001532
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
271
195
-
Met
CAT
[ENA]
¢þ
>WENV170957300
MKFH01001812
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
280
353
+
His
GTG
[ENA]
¢þ
>WENV170957267
MKFH01000212
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
281
205
-
Arg
TCG
[ENA]
¢þ
>WENV170957275
MKFH01000620
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
281
358
+
Asn
GTT
[ENA]
¢þ
>WENV170957293
MKFH01001417
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
286
197
-
Ser
GGA
[ENA]
¢þ
>WENV170957283
MKFH01001009
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
287
363
+
Trp
CCA
[ENA]
¢þ
>WENV170957265
MKFH01000132
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
288
363
+
Asn
GTT
[ENA]
¢þ
>WENV170957264
MKFH01000121
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
300
225
-
Pro
GGG
[ENA]
¢þ
>WENV170957282
MKFH01000778
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
300
375
+
Ala
GGC
[ENA]
¢þ
>WENV170957276
MKFH01000681
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
303
228
-
Thr
CGT
[ENA]
¢þ
>WENV170957269
MKFH01000240
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
311
235
-
Met
CAT
[ENA]
¢þ
>WENV170957296
MKFH01001555
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
313
238
-
Thr
TGT
[ENA]
¢þ
>WENV170957299
MKFH01001789
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
317
241
-
Lys
TTT
[ENA]
¢þ
>WENV170957284
MKFH01001014
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
326
250
-
Arg
CCG
[ENA]
¢þ
>WENV170957266
MKFH01000132
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
366
441
+
Thr
TGT
[ENA]
¢þ
>WENV170957268
MKFH01000228
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
375
287
-
Ser
GCT
[ENA]
¢þ
>WENV170957273
MKFH01000359
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
379
457
+
Val
TAC
[ENA]
¢þ
>WENV170957292
MKFH01001413
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
381
305
-
Arg
ACG
[ENA]
¢þ
>WENV170957270
MKFH01000258
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
391
315
-
Arg
TCG
[ENA]
¢þ
>WENV170957297
MKFH01001657
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
422
495
+
Gly
TCC
[ENA]
¢þ
>WENV170957279
MKFH01000711
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
503
577
+
Val
TAC
[ENA]
¢þ
>WENV170957280
MKFH01000732
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
512
436
-
Arg
TCT
[ENA]
¢þ
>WENV170957274
MKFH01000360
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
538
612
+
Arg
TCG
[ENA]
¢þ
>WENV170957286
MKFH01001046
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
542
456
-
Tyr
GTA
[ENA]
¢þ
>WENV170957287
MKFH01001141
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
572
496
-
Met
CAT
[ENA]
¢þ
>WENV170957285
MKFH01001046
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
619
544
-
Thr
GGT
[ENA]
¢þ
>WENV170957277
MKFH01000687
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
843
918
+
Ser
GCT
[ENA]
¢þ
>WENV170957289
MKFH01001143
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
1866
1790
-
Ala
TGC
[ENA]
¢þ
>WENV170957288
MKFH01001143
[MKFH] bioreactor metagenome; Viral particles filtered from anaerobic culture of Methylomirabilis and AOM associated archaea
2004
1928
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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