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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[NFYT] gut metagenome; feces
HIT:
6 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170999711
NFYT01000396
[NFYT] gut metagenome; feces
23
109
+
Trp
CCA
[ENA]
¢þ
>WENV170999712
NFYT01000396
[NFYT] gut metagenome; feces
257
331
+
Lys
TTT
[ENA]
¢þ
>WENV170999710
NFYT01000316
[NFYT] gut metagenome; feces
311
384
+
Gly
CCC
[ENA]
¢þ
>WENV170999709
NFYT01000137
[NFYT] gut metagenome; feces
343
269
-
Asp
GTC
[ENA]
¢þ
>WENV170999708
NFYT01000137
[NFYT] gut metagenome; feces
435
360
-
Thr
TGT
[ENA]
¢þ
>WENV170999707
NFYT01000137
[NFYT] gut metagenome; feces
590
515
-
Phe
GAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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