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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
[NFYY] gut metagenome; feces
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV170999892
NFYY01001465
[NFYY] gut metagenome; feces
18
93
+
Gln
TTG
[ENA]
¢þ
>WENV170999975
NFYY01010016
[NFYY] gut metagenome; feces
36
109
+
Thr
TGT
[ENA]
¢þ
>WENV170999945
NFYY01006467
[NFYY] gut metagenome; feces
63
137
+
Trp
CCA
[ENA]
¢þ
>WENV170999946
NFYY01006527
[NFYY] gut metagenome; feces
70
144
+
Asn
GTT
[ENA]
¢þ
>WENV170999906
NFYY01002726
[NFYY] gut metagenome; feces
74
1
-
Trp
CCA
[ENA]
¢þ
>WENV170999985
NFYY01010948
[NFYY] gut metagenome; feces
79
150
+
Lys
TTT
[ENA]
¢þ
>WENV170999929
NFYY01005911
[NFYY] gut metagenome; feces
85
157
+
Gln
TTG
[ENA]
¢þ
>WENV170999940
NFYY01006124
[NFYY] gut metagenome; feces
86
172
+
Tyr
GTA
[ENA]
¢þ
>WENV170999977
NFYY01010057
[NFYY] gut metagenome; feces
96
170
+
Glu
TTC
[ENA]
¢þ
>WENV170999919
NFYY01004538
[NFYY] gut metagenome; feces
100
26
-
Glu
TTC
[ENA]
¢þ
>WENV170999974
NFYY01009233
[NFYY] gut metagenome; feces
104
31
-
Lys
TTT
[ENA]
¢þ
>WENV170999976
NFYY01010016
[NFYY] gut metagenome; feces
113
187
+
Gly
TCC
[ENA]
¢þ
>WENV170999924
NFYY01004855
[NFYY] gut metagenome; feces
125
210
+
Leu
TAG
[ENA]
¢þ
>WENV170999880
NFYY01000518
[NFYY] gut metagenome; feces
159
234
+
Val
TAC
[ENA]
¢þ
>WENV170999930
NFYY01005911
[NFYY] gut metagenome; feces
162
234
+
Arg
TCT
[ENA]
¢þ
>WENV170999908
NFYY01003099
[NFYY] gut metagenome; feces
209
284
+
Trp
CCA
[ENA]
¢þ
>WENV170999884
NFYY01000889
[NFYY] gut metagenome; feces
211
291
+
Tyr
GTA
[ENA]
¢þ
>WENV170999921
NFYY01004756
[NFYY] gut metagenome; feces
234
308
+
Cys
GCA
[ENA]
¢þ
>WENV170999918
NFYY01004538
[NFYY] gut metagenome; feces
263
189
-
Gln
TTG
[ENA]
¢þ
>WENV170999953
NFYY01006674
[NFYY] gut metagenome; feces
267
192
-
Gln
TTG
[ENA]
¢þ
>WENV170999915
NFYY01004215
[NFYY] gut metagenome; feces
273
198
-
Thr
CGT
[ENA]
¢þ
>WENV170999954
NFYY01007277
[NFYY] gut metagenome; feces
274
358
+
Leu
TAA
[ENA]
¢þ
>WENV170999970
NFYY01008983
[NFYY] gut metagenome; feces
292
208
-
Tyr
GTA
[ENA]
¢þ
>WENV170999983
NFYY01010417
[NFYY] gut metagenome; feces
292
385
+
Ser
GCT
[ENA]
¢þ
>WENV170999957
NFYY01007317
[NFYY] gut metagenome; feces
299
373
+
Arg
TCT
[ENA]
¢þ
>WENV170999925
NFYY01004961
[NFYY] gut metagenome; feces
319
405
+
Leu
TAA
[ENA]
¢þ
>WENV170999973
NFYY01008993
[NFYY] gut metagenome; feces
326
252
-
Glu
CTC
[ENA]
¢þ
>WENV170999920
NFYY01004589
[NFYY] gut metagenome; feces
335
411
+
Met
CAT
[ENA]
¢þ
>WENV170999934
NFYY01005970
[NFYY] gut metagenome; feces
338
419
+
Leu
TAG
[ENA]
¢þ
>WENV170999942
NFYY01006283
[NFYY] gut metagenome; feces
344
272
-
Asn
GTT
[ENA]
¢þ
>WENV170999943
NFYY01006432
[NFYY] gut metagenome; feces
345
419
+
Arg
TCT
[ENA]
¢þ
>WENV170999965
NFYY01008704
[NFYY] gut metagenome; feces
365
451
+
Leu
CAA
[ENA]
¢þ
>WENV170999986
NFYY01010948
[NFYY] gut metagenome; feces
403
491
+
Leu
CAA
[ENA]
¢þ
>WENV170999958
NFYY01007330
[NFYY] gut metagenome; feces
421
496
+
Lys
TTT
[ENA]
¢þ
>WENV170999939
NFYY01006103
[NFYY] gut metagenome; feces
422
348
-
Asp
GTC
[ENA]
¢þ
>WENV170999922
NFYY01004756
[NFYY] gut metagenome; feces
447
532
+
Leu
TAA
[ENA]
¢þ
>WENV170999944
NFYY01006453
[NFYY] gut metagenome; feces
490
562
+
Ile
TAT
[ENA]
¢þ
>WENV170999987
NFYY01011139
[NFYY] gut metagenome; feces
491
564
+
Trp
CCA
[ENA]
¢þ
>WENV170999879
NFYY01000326
[NFYY] gut metagenome; feces
495
569
+
Arg
TCT
[ENA]
¢þ
>WENV170999972
NFYY01008993
[NFYY] gut metagenome; feces
497
425
-
Glu
CTC
[ENA]
¢þ
>WENV170999979
NFYY01010247
[NFYY] gut metagenome; feces
498
425
-
Ala
TGC
[ENA]
¢þ
>WENV170999947
NFYY01006527
[NFYY] gut metagenome; feces
500
574
+
Trp
CCA
[ENA]
¢þ
>WENV170999938
NFYY01006103
[NFYY] gut metagenome; feces
507
432
-
Glu
CTC
[ENA]
¢þ
>WENV170999931
NFYY01005911
[NFYY] gut metagenome; feces
513
588
+
Pro
TGG
[ENA]
¢þ
>WENV170999971
NFYY01008986
[NFYY] gut metagenome; feces
521
448
-
Gln
CTG
[ENA]
¢þ
>WENV170999969
NFYY01008983
[NFYY] gut metagenome; feces
549
477
-
Lys
CTT
[ENA]
¢þ
>WENV170999891
NFYY01001343
[NFYY] gut metagenome; feces
558
483
-
Gln
TTG
[ENA]
¢þ
>WENV170999982
NFYY01010390
[NFYY] gut metagenome; feces
577
487
-
Leu
TAG
[ENA]
¢þ
>WENV170999948
NFYY01006527
[NFYY] gut metagenome; feces
578
651
+
Ile
GAT
[ENA]
¢þ
>WENV170999937
NFYY01006103
[NFYY] gut metagenome; feces
586
512
-
Glu
TTC
[ENA]
¢þ
>WENV170999941
NFYY01006124
[NFYY] gut metagenome; feces
591
681
+
Ser
TGA
[ENA]
¢þ
>WENV170999955
NFYY01007277
[NFYY] gut metagenome; feces
595
670
+
Gly
GCC
[ENA]
¢þ
>WENV170999907
NFYY01002901
[NFYY] gut metagenome; feces
632
705
+
Gln
CTG
[ENA]
¢þ
>WENV170999885
NFYY01001055
[NFYY] gut metagenome; feces
634
706
+
Lys
TTT
[ENA]
¢þ
>WENV170999980
NFYY01010381
[NFYY] gut metagenome; feces
636
553
-
Leu
CAA
[ENA]
¢þ
>WENV170999949
NFYY01006527
[NFYY] gut metagenome; feces
656
728
+
Met
CAT
[ENA]
¢þ
>WENV170999981
NFYY01010390
[NFYY] gut metagenome; feces
669
581
-
Leu
TAA
[ENA]
¢þ
>WENV170999956
NFYY01007277
[NFYY] gut metagenome; feces
674
748
+
Gly
TCC
[ENA]
¢þ
>WENV170999916
NFYY01004355
[NFYY] gut metagenome; feces
687
613
-
Thr
TGT
[ENA]
¢þ
>WENV170999917
NFYY01004414
[NFYY] gut metagenome; feces
694
621
-
Gly
CCC
[ENA]
¢þ
>WENV170999905
NFYY01002709
[NFYY] gut metagenome; feces
718
793
+
Arg
CCT
[ENA]
¢þ
>WENV170999950
NFYY01006527
[NFYY] gut metagenome; feces
730
806
+
His
GTG
[ENA]
¢þ
>WENV170999909
NFYY01003207
[NFYY] gut metagenome; feces
753
834
+
Leu
TAA
[ENA]
¢þ
>WENV170999936
NFYY01006103
[NFYY] gut metagenome; feces
756
684
-
Arg
TCT
[ENA]
¢þ
>WENV170999964
NFYY01008552
[NFYY] gut metagenome; feces
770
697
-
Gln
CTG
[ENA]
¢þ
>WENV170999886
NFYY01001055
[NFYY] gut metagenome; feces
790
864
+
Arg
CCT
[ENA]
¢þ
>WENV170999951
NFYY01006527
[NFYY] gut metagenome; feces
811
887
+
Ile
TAT
[ENA]
¢þ
>WENV170999935
NFYY01006103
[NFYY] gut metagenome; feces
832
758
-
Gln
TTG
[ENA]
¢þ
>WENV170999883
NFYY01000758
[NFYY] gut metagenome; feces
839
763
-
Gly
TCC
[ENA]
¢þ
>WENV170999932
NFYY01005911
[NFYY] gut metagenome; feces
843
928
+
Tyr
GTA
[ENA]
¢þ
>WENV170999963
NFYY01008552
[NFYY] gut metagenome; feces
886
813
-
Gln
CTG
[ENA]
¢þ
>WENV170999952
NFYY01006527
[NFYY] gut metagenome; feces
889
966
+
Cys
GCA
[ENA]
¢þ
>WENV170999890
NFYY01001343
[NFYY] gut metagenome; feces
920
835
-
Tyr
GTA
[ENA]
¢þ
>WENV170999959
NFYY01007649
[NFYY] gut metagenome; feces
960
1035
+
Lys
TTT
[ENA]
¢þ
>WENV170999887
NFYY01001055
[NFYY] gut metagenome; feces
975
1050
+
Arg
TCT
[ENA]
¢þ
>WENV170999923
NFYY01004756
[NFYY] gut metagenome; feces
975
1065
+
Leu
TAG
[ENA]
¢þ
>WENV170999914
NFYY01004006
[NFYY] gut metagenome; feces
977
904
-
Gln
TTG
[ENA]
¢þ
>WENV170999933
NFYY01005911
[NFYY] gut metagenome; feces
990
1066
+
Val
TAC
[ENA]
¢þ
>WENV170999978
NFYY01010230
[NFYY] gut metagenome; feces
1081
1008
-
Gln
CTG
[ENA]
¢þ
>WENV170999968
NFYY01008973
[NFYY] gut metagenome; feces
1115
1031
-
Leu
TAG
[ENA]
¢þ
>WENV170999960
NFYY01007656
[NFYY] gut metagenome; feces
1117
1044
-
Gln
TTG
[ENA]
¢þ
>WENV170999984
NFYY01010631
[NFYY] gut metagenome; feces
1340
1266
-
Glu
TTC
[ENA]
¢þ
>WENV170999926
NFYY01005153
[NFYY] gut metagenome; feces
1519
1446
-
Lys
TTT
[ENA]
¢þ
>WENV170999910
NFYY01003382
[NFYY] gut metagenome; feces
1778
1851
+
Sup
CTA
[ENA]
¢þ
>WENV170999911
NFYY01003382
[NFYY] gut metagenome; feces
1861
1935
+
Thr
TGT
[ENA]
¢þ
>WENV170999888
NFYY01001317
[NFYY] gut metagenome; feces
1905
1832
-
Gln
CTG
[ENA]
¢þ
>WENV170999889
NFYY01001324
[NFYY] gut metagenome; feces
1924
1851
-
Gln
CTG
[ENA]
¢þ
>WENV170999913
NFYY01003774
[NFYY] gut metagenome; feces
1991
2065
+
Thr
TGT
[ENA]
¢þ
>WENV170999912
NFYY01003382
[NFYY] gut metagenome; feces
2012
2086
+
Phe
GAA
[ENA]
¢þ
>WENV170999904
NFYY01002684
[NFYY] gut metagenome; feces
2048
1975
-
Gln
CTG
[ENA]
¢þ
>WENV170999878
NFYY01000072
[NFYY] gut metagenome; feces
2067
1991
-
Glu
CTC
[ENA]
¢þ
>WENV170999961
NFYY01008337
[NFYY] gut metagenome; feces
2225
2151
-
Thr
TGT
[ENA]
¢þ
>WENV170999877
NFYY01000072
[NFYY] gut metagenome; feces
2407
2332
-
Ile
GAT
[ENA]
¢þ
>WENV170999881
NFYY01000685
[NFYY] gut metagenome; feces
2778
2854
+
Leu
TAA
[ENA]
¢þ
>WENV170999876
NFYY01000072
[NFYY] gut metagenome; feces
3096
3010
-
Leu
GAG
[ENA]
¢þ
>WENV170999875
NFYY01000072
[NFYY] gut metagenome; feces
3333
3247
-
Leu
CAA
[ENA]
¢þ
>WENV170999962
NFYY01008388
[NFYY] gut metagenome; feces
3374
3301
-
Gln
CTG
[ENA]
¢þ
>WENV170999874
NFYY01000072
[NFYY] gut metagenome; feces
3422
3337
-
Leu
CAG
[ENA]
¢þ
>WENV170999873
NFYY01000072
[NFYY] gut metagenome; feces
3750
3677
-
Gln
CTG
[ENA]
¢þ
>WENV170999882
NFYY01000685
[NFYY] gut metagenome; feces
3945
3875
-
Gln
TTG
[ENA]
¢þ
>WENV170999903
NFYY01002036
[NFYY] gut metagenome; feces
4056
3982
-
Pro
TGG
[ENA]
¢þ
>WENV170999902
NFYY01002036
[NFYY] gut metagenome; feces
4361
4277
-
Leu
TAA
[ENA]
¢þ
>WENV170999872
NFYY01000072
[NFYY] gut metagenome; feces
4372
4295
-
Arg
ACG
[ENA]
¢þ
>WENV170999901
NFYY01002036
[NFYY] gut metagenome; feces
4695
4622
-
Gln
TTG
[ENA]
¢þ
>WENV170999871
NFYY01000072
[NFYY] gut metagenome; feces
4803
4714
-
Ser
GGA
[ENA]
¢þ
>WENV170999900
NFYY01002036
[NFYY] gut metagenome; feces
4856
4770
-
Leu
CAA
[ENA]
¢þ
>WENV170999870
NFYY01000072
[NFYY] gut metagenome; feces
4957
4882
-
Lys
CTT
[ENA]
¢þ
>WENV170999869
NFYY01000072
[NFYY] gut metagenome; feces
5035
4959
-
Arg
TCT
[ENA]
¢þ
>WENV170999899
NFYY01002036
[NFYY] gut metagenome; feces
5111
5036
-
Lys
TTT
[ENA]
¢þ
>WENV170999898
NFYY01002036
[NFYY] gut metagenome; feces
5191
5116
-
Ala
TGC
[ENA]
¢þ
>WENV170999897
NFYY01002036
[NFYY] gut metagenome; feces
5270
5195
-
Thr
TGT
[ENA]
¢þ
>WENV170999868
NFYY01000072
[NFYY] gut metagenome; feces
5406
5332
-
Cys
GCA
[ENA]
¢þ
>WENV170999896
NFYY01002036
[NFYY] gut metagenome; feces
5559
5483
-
Met
CAT
[ENA]
¢þ
>WENV170999867
NFYY01000072
[NFYY] gut metagenome; feces
5564
5488
-
Glu
TTC
[ENA]
¢þ
>WENV170999866
NFYY01000072
[NFYY] gut metagenome; feces
5941
5866
-
Thr
GGT
[ENA]
¢þ
>WENV170999865
NFYY01000072
[NFYY] gut metagenome; feces
6430
6355
-
Val
TAC
[ENA]
¢þ
>WENV170999895
NFYY01002036
[NFYY] gut metagenome; feces
6509
6435
-
Glu
TTC
[ENA]
¢þ
>WENV170999894
NFYY01002036
[NFYY] gut metagenome; feces
6717
6643
-
Phe
GAA
[ENA]
¢þ
>WENV170999864
NFYY01000072
[NFYY] gut metagenome; feces
6831
6756
-
Thr
TGT
[ENA]
¢þ
>WENV170999863
NFYY01000072
[NFYY] gut metagenome; feces
6919
6835
-
Leu
TAG
[ENA]
¢þ
>WENV170999893
NFYY01002030
[NFYY] gut metagenome; feces
6996
7071
+
Lys
TTT
[ENA]
¢þ
>WENV170999862
NFYY01000072
[NFYY] gut metagenome; feces
7448
7374
-
Gly
GCC
[ENA]
¢þ
>WENV170999861
NFYY01000072
[NFYY] gut metagenome; feces
7729
7654
-
Asn
GTT
[ENA]
¢þ
>WENV170999860
NFYY01000072
[NFYY] gut metagenome; feces
7854
7779
-
Ala
TGC
[ENA]
¢þ
>WENV170999859
NFYY01000072
[NFYY] gut metagenome; feces
7933
7858
-
Pro
TGG
[ENA]
¢þ
>WENV170999858
NFYY01000072
[NFYY] gut metagenome; feces
8321
8246
-
Met
CAT
[ENA]
¢þ
>WENV170999857
NFYY01000072
[NFYY] gut metagenome; feces
8400
8327
-
Met
CAT
[ENA]
¢þ
>WENV170999928
NFYY01005730
[NFYY] gut metagenome; feces
8606
8531
-
Lys
TTT
[ENA]
¢þ
>WENV170999967
NFYY01008796
[NFYY] gut metagenome; feces
8671
8595
-
Phe
GAA
[ENA]
¢þ
>WENV170999966
NFYY01008796
[NFYY] gut metagenome; feces
8763
8675
-
Ser
GCT
[ENA]
¢þ
>WENV170999927
NFYY01005730
[NFYY] gut metagenome; feces
8771
8697
-
Gln
TTG
[ENA]
¢þ
>WENV170999856
NFYY01000072
[NFYY] gut metagenome; feces
8798
8725
-
Trp
CCA
[ENA]
¢þ
>WENV170999855
NFYY01000072
[NFYY] gut metagenome; feces
9008
8934
-
Gly
TCC
[ENA]
¢þ
>WENV170999854
NFYY01000072
[NFYY] gut metagenome; feces
9561
9486
-
Lys
TTT
[ENA]
¢þ
>WENV170999853
NFYY01000072
[NFYY] gut metagenome; feces
11896
11821
-
Met
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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