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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OAUT] human gut metagenome; faeces
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180154348
OAUT01009653
[OAUT] human gut metagenome; faeces
33
104
+
Cys
GCA
[ENA]
¢þ
>WENV180154345
OAUT01004367
[OAUT] human gut metagenome; faeces
34
105
+
Glu
CTC
[ENA]
¢þ
>WENV180154350
OAUT01012526
[OAUT] human gut metagenome; faeces
83
157
+
Ile
GAT
[ENA]
¢þ
>WENV180154347
OAUT01008209
[OAUT] human gut metagenome; faeces
85
14
-
Glu
TTC
[ENA]
¢þ
>WENV180154344
OAUT01002771
[OAUT] human gut metagenome; faeces
101
27
-
Asn
GTT
[ENA]
¢þ
>WENV180154349
OAUT01009653
[OAUT] human gut metagenome; faeces
144
216
+
Val
GAC
[ENA]
¢þ
>WENV180154351
OAUT01012745
[OAUT] human gut metagenome; faeces
190
116
-
Ala
TGC
[ENA]
¢þ
>WENV180154346
OAUT01006642
[OAUT] human gut metagenome; faeces
225
295
+
Gly
CCC
[ENA]
¢þ
>WENV180154343
OAUT01002452
[OAUT] human gut metagenome; faeces
577
503
-
Asn
GTT
[ENA]
¢þ
>WENV180154341
OAUT01000206
[OAUT] human gut metagenome; faeces
1218
1146
-
Met
CAT
[ENA]
¢þ
>WENV180154342
OAUT01000379
[OAUT] human gut metagenome; faeces
1318
1395
+
Leu
TAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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