This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OBGL] soil metagenome; soil
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180274209
OBGL01001789
[OBGL] soil metagenome; soil
20
91
+
Glu
CTC
[ENA]
¢þ
>WENV180274208
OBGL01001617
[OBGL] soil metagenome; soil
39
114
+
Phe
GAA
[ENA]
¢þ
>WENV180274207
OBGL01001153
[OBGL] soil metagenome; soil
71
147
+
Pro
GGG
[ENA]
¢þ
>WENV180274210
OBGL01001817
[OBGL] soil metagenome; soil
100
24
-
Met
CAT
[ENA]
¢þ
>WENV180274212
OBGL01001919
[OBGL] soil metagenome; soil
170
84
-
Leu
CAG
[ENA]
¢þ
>WENV180274211
OBGL01001831
[OBGL] soil metagenome; soil
202
126
-
fMet
CAT
[ENA]
¢þ
>WENV180274205
OBGL01000011
[OBGL] soil metagenome; soil
1985
2061
+
Ile
GAT
[ENA]
¢þ
>WENV180274206
OBGL01000011
[OBGL] soil metagenome; soil
2104
2179
+
Ala
TGC
[ENA]
¢þ
>WENV180274204
OBGL01000001
[OBGL] soil metagenome; soil
12197
12272
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK