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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OBJY] human gut metagenome; human gut
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180312519
OBJY01015064
[OBJY] human gut metagenome; human gut
1
76
+
Lys
TTT
[ENA]
¢þ
>WENV180312516
OBJY01015007
[OBJY] human gut metagenome; human gut
1
76
+
Val
TAC
[ENA]
¢þ
>WENV180312515
OBJY01014967
[OBJY] human gut metagenome; human gut
1
76
+
Ala
GGC
[ENA]
¢þ
>WENV180312518
OBJY01015026
[OBJY] human gut metagenome; human gut
1
77
+
Asp
GTC
[ENA]
¢þ
>WENV180312514
OBJY01014913
[OBJY] human gut metagenome; human gut
6
81
+
Asn
GTT
[ENA]
¢þ
>WENV180312512
OBJY01011362
[OBJY] human gut metagenome; human gut
15
90
+
Gly
GCC
[ENA]
¢þ
>WENV180312509
OBJY01009902
[OBJY] human gut metagenome; human gut
25
98
+
Ile
TAT
[ENA]
¢þ
>WENV180312498
OBJY01006826
[OBJY] human gut metagenome; human gut
37
113
+
Lys
TTT
[ENA]
¢þ
>WENV180312507
OBJY01009459
[OBJY] human gut metagenome; human gut
62
137
+
Thr
GGT
[ENA]
¢þ
>WENV180312472
OBJY01000289
[OBJY] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¢þ
>WENV180312517
OBJY01015010
[OBJY] human gut metagenome; human gut
78
2
-
Arg
ACG
[ENA]
¢þ
>WENV180312505
OBJY01008050
[OBJY] human gut metagenome; human gut
89
13
-
Met
CAT
[ENA]
¢þ
>WENV180312496
OBJY01005717
[OBJY] human gut metagenome; human gut
93
18
-
Phe
GAA
[ENA]
¢þ
>WENV180312485
OBJY01002831
[OBJY] human gut metagenome; human gut
96
172
+
Pro
TGG
[ENA]
¢þ
>WENV180312458
OBJY01000074
[OBJY] human gut metagenome; human gut
101
176
+
Thr
TGT
[ENA]
¢þ
>WENV180312494
OBJY01005527
[OBJY] human gut metagenome; human gut
102
26
-
Arg
CCG
[ENA]
¢þ
>WENV180312500
OBJY01007473
[OBJY] human gut metagenome; human gut
110
196
+
Leu
CAG
[ENA]
¢þ
>WENV180312463
OBJY01000169
[OBJY] human gut metagenome; human gut
112
184
+
Arg
ACG
[ENA]
¢þ
>WENV180312483
OBJY01002625
[OBJY] human gut metagenome; human gut
113
37
-
Pro
CGG
[ENA]
¢þ
>WENV180312511
OBJY01010876
[OBJY] human gut metagenome; human gut
116
40
-
Arg
ACG
[ENA]
¢þ
>WENV180312503
OBJY01007822
[OBJY] human gut metagenome; human gut
121
33
-
Ser
TGA
[ENA]
¢þ
>WENV180312513
OBJY01011521
[OBJY] human gut metagenome; human gut
122
194
+
Val
CAC
[ENA]
¢þ
>WENV180312508
OBJY01009549
[OBJY] human gut metagenome; human gut
132
57
-
Lys
CTT
[ENA]
¢þ
>WENV180312510
OBJY01010397
[OBJY] human gut metagenome; human gut
135
211
+
Arg
CCG
[ENA]
¢þ
>WENV180312506
OBJY01008401
[OBJY] human gut metagenome; human gut
139
213
+
Ile
TAT
[ENA]
¢þ
>WENV180312487
OBJY01003630
[OBJY] human gut metagenome; human gut
146
219
+
Met
CAT
[ENA]
¢þ
>WENV180312476
OBJY01000395
[OBJY] human gut metagenome; human gut
150
58
-
Ser
GCT
[ENA]
¢þ
>WENV180312492
OBJY01004572
[OBJY] human gut metagenome; human gut
153
228
+
Ala
TGC
[ENA]
¢þ
>WENV180312501
OBJY01007619
[OBJY] human gut metagenome; human gut
164
248
+
Leu
GAG
[ENA]
¢þ
>WENV180312499
OBJY01006826
[OBJY] human gut metagenome; human gut
165
250
+
Tyr
GTA
[ENA]
¢þ
>WENV180312486
OBJY01003555
[OBJY] human gut metagenome; human gut
169
93
-
fMet
CAT
[ENA]
¢þ
>WENV180312491
OBJY01004468
[OBJY] human gut metagenome; human gut
173
102
-
Thr
TGT
[ENA]
¢þ
>WENV180312497
OBJY01006447
[OBJY] human gut metagenome; human gut
178
253
+
Val
TAC
[ENA]
¢þ
>WENV180312504
OBJY01008050
[OBJY] human gut metagenome; human gut
179
105
-
Gln
TTG
[ENA]
¢þ
>WENV180312502
OBJY01007822
[OBJY] human gut metagenome; human gut
204
129
-
Lys
TTT
[ENA]
¢þ
>WENV180312495
OBJY01005536
[OBJY] human gut metagenome; human gut
206
120
-
Leu
GAG
[ENA]
¢þ
>WENV180312490
OBJY01004427
[OBJY] human gut metagenome; human gut
233
160
-
Trp
CCA
[ENA]
¢þ
>WENV180312489
OBJY01003903
[OBJY] human gut metagenome; human gut
250
176
-
Trp
CCA
[ENA]
¢þ
>WENV180312479
OBJY01000699
[OBJY] human gut metagenome; human gut
279
197
-
Leu
CAA
[ENA]
¢þ
>WENV180312473
OBJY01000327
[OBJY] human gut metagenome; human gut
293
377
+
Leu
TAA
[ENA]
¢þ
>WENV180312488
OBJY01003903
[OBJY] human gut metagenome; human gut
330
254
-
Ile2
CAT
[ENA]
¢þ
>WENV180312493
OBJY01004991
[OBJY] human gut metagenome; human gut
348
264
-
Tyr
GTA
[ENA]
¢þ
>WENV180312484
OBJY01002815
[OBJY] human gut metagenome; human gut
355
280
-
Pro
TGG
[ENA]
¢þ
>WENV180312482
OBJY01001690
[OBJY] human gut metagenome; human gut
393
480
+
Ser
TGA
[ENA]
¢þ
>WENV180312480
OBJY01001093
[OBJY] human gut metagenome; human gut
419
346
-
Gly
CCC
[ENA]
¢þ
>WENV180312461
OBJY01000127
[OBJY] human gut metagenome; human gut
424
508
+
Leu
CAA
[ENA]
¢þ
>WENV180312478
OBJY01000668
[OBJY] human gut metagenome; human gut
432
504
+
Arg
CCG
[ENA]
¢þ
>WENV180312470
OBJY01000288
[OBJY] human gut metagenome; human gut
662
738
+
Ile
GAT
[ENA]
¢þ
>WENV180312471
OBJY01000288
[OBJY] human gut metagenome; human gut
781
856
+
Ala
TGC
[ENA]
¢þ
>WENV180312481
OBJY01001395
[OBJY] human gut metagenome; human gut
813
738
-
Ile2
CAT
[ENA]
¢þ
>WENV180312464
OBJY01000279
[OBJY] human gut metagenome; human gut
824
900
+
Gln
TTG
[ENA]
¢þ
>WENV180312465
OBJY01000279
[OBJY] human gut metagenome; human gut
904
989
+
Ser
TGA
[ENA]
¢þ
>WENV180312477
OBJY01000473
[OBJY] human gut metagenome; human gut
1010
921
-
Ser
CGA
[ENA]
¢þ
>WENV180312466
OBJY01000279
[OBJY] human gut metagenome; human gut
1053
1126
+
Gly
TCC
[ENA]
¢þ
>WENV180312467
OBJY01000279
[OBJY] human gut metagenome; human gut
1248
1322
+
Ile2
CAT
[ENA]
¢þ
>WENV180312449
OBJY01000052
[OBJY] human gut metagenome; human gut
1250
1334
+
Tyr
GTA
[ENA]
¢þ
>WENV180312450
OBJY01000052
[OBJY] human gut metagenome; human gut
1400
1472
+
Gly
TCC
[ENA]
¢þ
>WENV180312451
OBJY01000052
[OBJY] human gut metagenome; human gut
1702
1788
+
fMet
CAT
[ENA]
¢þ
>WENV180312474
OBJY01000327
[OBJY] human gut metagenome; human gut
1706
1778
+
Lys
CTT
[ENA]
¢þ
>WENV180312468
OBJY01000279
[OBJY] human gut metagenome; human gut
1817
1899
+
Leu
TAG
[ENA]
¢þ
>WENV180312469
OBJY01000279
[OBJY] human gut metagenome; human gut
1993
2069
+
Leu
CAA
[ENA]
¢þ
>WENV180312452
OBJY01000052
[OBJY] human gut metagenome; human gut
2243
2317
+
Pro
TGG
[ENA]
¢þ
>WENV180312428
OBJY01000013
[OBJY] human gut metagenome; human gut
2384
2458
+
Thr
TGT
[ENA]
¢þ
>WENV180312429
OBJY01000013
[OBJY] human gut metagenome; human gut
2462
2537
+
Glu
TTC
[ENA]
¢þ
>WENV180312475
OBJY01000362
[OBJY] human gut metagenome; human gut
2553
2478
-
Ala
GGC
[ENA]
¢þ
>WENV180312430
OBJY01000013
[OBJY] human gut metagenome; human gut
2585
2670
+
Tyr
GTA
[ENA]
¢þ
>WENV180312431
OBJY01000013
[OBJY] human gut metagenome; human gut
2675
2751
+
Asn
GTT
[ENA]
¢þ
>WENV180312453
OBJY01000052
[OBJY] human gut metagenome; human gut
2689
2760
+
Cys
GCA
[ENA]
¢þ
>WENV180312462
OBJY01000161
[OBJY] human gut metagenome; human gut
2953
3029
+
Arg
TCT
[ENA]
¢þ
>WENV180312454
OBJY01000052
[OBJY] human gut metagenome; human gut
3470
3558
+
Ser
TGA
[ENA]
¢þ
>WENV180312460
OBJY01000096
[OBJY] human gut metagenome; human gut
4151
4227
+
Pro
GGG
[ENA]
¢þ
>WENV180312455
OBJY01000052
[OBJY] human gut metagenome; human gut
4187
4259
+
Arg
TCT
[ENA]
¢þ
>WENV180312459
OBJY01000079
[OBJY] human gut metagenome; human gut
4292
4205
-
Ser
GGA
[ENA]
¢þ
>WENV180312443
OBJY01000033
[OBJY] human gut metagenome; human gut
4821
4749
-
Arg
CCT
[ENA]
¢þ
>WENV180312433
OBJY01000021
[OBJY] human gut metagenome; human gut
4964
5039
+
Gly
GCC
[ENA]
¢þ
>WENV180312442
OBJY01000033
[OBJY] human gut metagenome; human gut
4991
4917
-
Met
CAT
[ENA]
¢þ
>WENV180312434
OBJY01000021
[OBJY] human gut metagenome; human gut
5094
5167
+
Cys
GCA
[ENA]
¢þ
>WENV180312435
OBJY01000021
[OBJY] human gut metagenome; human gut
5180
5266
+
Leu
TAA
[ENA]
¢þ
>WENV180312456
OBJY01000052
[OBJY] human gut metagenome; human gut
5617
5689
+
Glu
CTC
[ENA]
¢þ
>WENV180312457
OBJY01000052
[OBJY] human gut metagenome; human gut
5967
6041
+
Thr
TGT
[ENA]
¢þ
>WENV180312444
OBJY01000034
[OBJY] human gut metagenome; human gut
7185
7261
+
Val
GAC
[ENA]
¢þ
>WENV180312445
OBJY01000034
[OBJY] human gut metagenome; human gut
7266
7342
+
Val
GAC
[ENA]
¢þ
>WENV180312440
OBJY01000025
[OBJY] human gut metagenome; human gut
7645
7560
-
Ser
TGA
[ENA]
¢þ
>WENV180312439
OBJY01000025
[OBJY] human gut metagenome; human gut
7737
7649
-
Ser
GCT
[ENA]
¢þ
>WENV180312414
OBJY01000003
[OBJY] human gut metagenome; human gut
8662
8735
+
Glu
TTC
[ENA]
¢þ
>WENV180312415
OBJY01000003
[OBJY] human gut metagenome; human gut
9207
9288
+
Tyr
GTA
[ENA]
¢þ
>WENV180312446
OBJY01000048
[OBJY] human gut metagenome; human gut
9268
9344
+
Ile2
CAT
[ENA]
¢þ
>WENV180312447
OBJY01000048
[OBJY] human gut metagenome; human gut
9424
9498
+
Gln
TTG
[ENA]
¢þ
>WENV180312448
OBJY01000048
[OBJY] human gut metagenome; human gut
9502
9586
+
Leu
TAG
[ENA]
¢þ
>WENV180312438
OBJY01000025
[OBJY] human gut metagenome; human gut
10808
10725
-
Tyr
GTA
[ENA]
¢þ
>WENV180312427
OBJY01000010
[OBJY] human gut metagenome; human gut
11079
11004
-
Pro
TGG
[ENA]
¢þ
>WENV180312426
OBJY01000010
[OBJY] human gut metagenome; human gut
11283
11208
-
Thr
TGT
[ENA]
¢þ
>WENV180312425
OBJY01000010
[OBJY] human gut metagenome; human gut
11586
11511
-
Thr
CGT
[ENA]
¢þ
>WENV180312424
OBJY01000010
[OBJY] human gut metagenome; human gut
11821
11747
-
Gln
TTG
[ENA]
¢þ
>WENV180312423
OBJY01000010
[OBJY] human gut metagenome; human gut
12016
11940
-
Gly
TCC
[ENA]
¢þ
>WENV180312422
OBJY01000010
[OBJY] human gut metagenome; human gut
12278
12203
-
Trp
CCA
[ENA]
¢þ
>WENV180312416
OBJY01000004
[OBJY] human gut metagenome; human gut
12673
12746
+
Cys
GCA
[ENA]
¢þ
>WENV180312441
OBJY01000032
[OBJY] human gut metagenome; human gut
13507
13413
-
SeC
TCA
[ENA]
¢þ
>WENV180312437
OBJY01000025
[OBJY] human gut metagenome; human gut
14213
14138
-
Pro
TGG
[ENA]
¢þ
>WENV180312436
OBJY01000025
[OBJY] human gut metagenome; human gut
15174
15101
-
Asn
GTT
[ENA]
¢þ
>WENV180312421
OBJY01000010
[OBJY] human gut metagenome; human gut
19213
19129
-
Leu
TAA
[ENA]
¢þ
>WENV180312420
OBJY01000010
[OBJY] human gut metagenome; human gut
20907
20818
-
Ser
TGA
[ENA]
¢þ
>WENV180312432
OBJY01000015
[OBJY] human gut metagenome; human gut
20949
20857
-
Ser
GCT
[ENA]
¢þ
>WENV180312419
OBJY01000010
[OBJY] human gut metagenome; human gut
21683
21608
-
Lys
TTT
[ENA]
¢þ
>WENV180312418
OBJY01000010
[OBJY] human gut metagenome; human gut
21938
21855
-
Leu
CAA
[ENA]
¢þ
>WENV180312417
OBJY01000010
[OBJY] human gut metagenome; human gut
22600
22525
-
Ala
TGC
[ENA]
¢þ
>WENV180312413
OBJY01000002
[OBJY] human gut metagenome; human gut
58951
58870
-
Leu
TAG
[ENA]
¢þ
>WENV180312412
OBJY01000002
[OBJY] human gut metagenome; human gut
60349
60275
-
Phe
GAA
[ENA]
¢þ
>WENV180312411
OBJY01000002
[OBJY] human gut metagenome; human gut
61903
61830
-
Ile2
CAT
[ENA]
¢þ
>WENV180312410
OBJY01000002
[OBJY] human gut metagenome; human gut
62399
62328
-
Gln
TTG
[ENA]
¢þ
>WENV180312409
OBJY01000001
[OBJY] human gut metagenome; human gut
84802
84717
-
Tyr
GTA
[ENA]
¢þ
>WENV180312408
OBJY01000001
[OBJY] human gut metagenome; human gut
84885
84809
-
Glu
TTC
[ENA]
¢þ
>WENV180312407
OBJY01000001
[OBJY] human gut metagenome; human gut
84969
84893
-
Glu
CTC
[ENA]
¢þ
>WENV180312406
OBJY01000001
[OBJY] human gut metagenome; human gut
85128
85053
-
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK