This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OBND] sediment metagenome; sediment
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV180354658
OBND01003896
[OBND] sediment metagenome; sediment
5
81
+
Pro
CGG
[ENA]
¢þ
>WENV180354657
OBND01002008
[OBND] sediment metagenome; sediment
20
93
+
Gly
CCC
[ENA]
¢þ
>WENV180354647
OBND01000135
[OBND] sediment metagenome; sediment
61
137
+
Ile
GAT
[ENA]
¢þ
>WENV180354651
OBND01000801
[OBND] sediment metagenome; sediment
82
157
+
Thr
TGT
[ENA]
¢þ
>WENV180354652
OBND01001046
[OBND] sediment metagenome; sediment
112
22
-
Ser
CGA
[ENA]
¢þ
>WENV180354648
OBND01000218
[OBND] sediment metagenome; sediment
129
204
+
Gly
GCC
[ENA]
¢þ
>WENV180354659
OBND01004150
[OBND] sediment metagenome; sediment
137
213
+
fMet
CAT
[ENA]
¢þ
>WENV180354655
OBND01001477
[OBND] sediment metagenome; sediment
244
168
-
Pro
GGG
[ENA]
¢þ
>WENV180354649
OBND01000719
[OBND] sediment metagenome; sediment
260
334
+
Val
TAC
[ENA]
¢þ
>WENV180354650
OBND01000719
[OBND] sediment metagenome; sediment
361
437
+
Asp
GTC
[ENA]
¢þ
>WENV180354656
OBND01001752
[OBND] sediment metagenome; sediment
393
318
-
Lys
CTT
[ENA]
¢þ
>WENV180354654
OBND01001153
[OBND] sediment metagenome; sediment
393
468
+
Thr
CGT
[ENA]
¢þ
>WENV180354653
OBND01001138
[OBND] sediment metagenome; sediment
445
520
+
Ala
TGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK