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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA gene List
Aminicenantes
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W141139576
AWNU01000070
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
647
739
+
Ser
CGA
[ENA]
¡û
>W141139575
AWNU01000062
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
1162
1237
+
Arg
ACG
[ENA]
¡û
>W141139588
AWNU01000152
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
1197
1123
-
Phe
GAA
[ENA]
¡û
>W141139580
AWNU01000076
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
2102
2177
+
Asn
GTT
[ENA]
¡û
>W141139577
AWNU01000070
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
2122
2214
+
Ser
GGA
[ENA]
¡û
>W141139564
AWNU01000020
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
2221
2147
-
Lys
CTT
[ENA]
¡û
>W141139585
AWNU01000133
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
2429
2335
-
Ser
GCT
[ENA]
¡û
>W141139556
AWNU01000005
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
2509
2433
-
Pro
GGG
[ENA]
¡û
>W141139584
AWNU01000133
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
2815
2727
-
Ser
TGA
[ENA]
¡û
>W141139586
AWNU01000144
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
3170
3096
-
Met
CAT
[ENA]
¡û
>W141139578
AWNU01000071
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
3477
3549
+
Gly
CCC
[ENA]
¡û
>W141139587
AWNU01000148
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
4260
4184
-
His
GTG
[ENA]
¡û
>W141139583
AWNU01000114
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
5329
5252
-
Arg
TCT
[ENA]
¡û
>W141139574
AWNU01000059
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
5352
5426
+
Thr
CGT
[ENA]
¡û
>W141139582
AWNU01000114
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
5525
5451
-
Pro
TGG
[ENA]
¡û
>W141139559
AWNU01000013
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
6063
6139
+
Asp
GTC
[ENA]
¡û
>W141139581
AWNU01000079
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
7565
7490
-
Ala
CGC
[ENA]
¡û
>W141139573
AWNU01000058
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
8559
8482
-
Arg
CCT
[ENA]
¡û
>W141139571
AWNU01000042
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
11138
11052
-
Leu
CAG
[ENA]
¡û
>W141139568
AWNU01000033
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
12061
12135
+
Lys
TTT
[ENA]
¡û
>W141139569
AWNU01000033
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
12146
12221
+
Glu
TTC
[ENA]
¡û
>W141139572
AWNU01000055
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
14169
14095
-
Val
CAC
[ENA]
¡û
>W141139565
AWNU01000022
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
15463
15538
+
Ala
GGC
[ENA]
¡û
>W141139563
AWNU01000020
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
15625
15550
-
Arg
TCG
[ENA]
¡û
>W141139579
AWNU01000071
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
15786
15873
+
Leu
CAA
[ENA]
¡û
>W141139555
AWNU01000003
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
16509
16593
+
Leu
TAG
[ENA]
¡û
>W141139570
AWNU01000033
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
17825
17751
-
Val
TAC
[ENA]
¡û
>W141139557
AWNU01000009
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
19336
19409
+
Gln
CTG
[ENA]
¡û
>W141139566
AWNU01000023
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
20191
20267
+
Ile
GAT
[ENA]
¡û
>W141139567
AWNU01000023
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
20279
20354
+
Ala
TGC
[ENA]
¡û
>W141139562
AWNU01000016
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
23052
22976
-
Met
CAT
[ENA]
¡û
>W141139560
AWNU01000014
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
43706
43780
+
Gly
GCC
[ENA]
¡û
>W141139561
AWNU01000014
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
45546
45621
+
Cys
GCA
[ENA]
¡û
>W141139558
AWNU01000009
Aminicenantes
Aminicenantes bacterium JGI OTU-2 [AWNU]
53375
53300
-
Glu
CTC
[ENA]
¡û
>W141139624
AWNV01000059
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
568
640
+
Thr
TGT
[ENA]
¡û
>W141139625
AWNV01000059
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
765
849
+
Tyr
GTA
[ENA]
¡û
>W141139626
AWNV01000059
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
853
927
+
Gly
TCC
[ENA]
¡û
>W141139627
AWNV01000059
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
947
1019
+
Thr
GGT
[ENA]
¡û
>W141139611
AWNV01000032
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
1793
1718
-
Glu
CTC
[ENA]
¡û
>W141139596
AWNV01000007
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
2066
2140
+
Gln
TTG
[ENA]
¡û
>W141139628
AWNV01000059
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
2520
2596
+
Trp
CCA
[ENA]
¡û
>W141139630
AWNV01000088
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
4263
4189
-
His
GTG
[ENA]
¡û
>W141139631
AWNV01000108
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
4312
4386
+
Met
CAT
[ENA]
¡û
>W141139617
AWNV01000042
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
4812
4886
+
Val
CAC
[ENA]
¡û
>W141139629
AWNV01000068
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
5534
5609
+
Asn
GTT
[ENA]
¡û
>W141139612
AWNV01000033
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
7347
7272
-
Arg
CCG
[ENA]
¡û
>W141139622
AWNV01000047
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
7855
7780
-
Arg
ACG
[ENA]
¡û
>W141139616
AWNV01000036
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
9090
9018
-
Thr
CGT
[ENA]
¡û
>W141139623
AWNV01000055
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
9996
10080
+
Leu
TAG
[ENA]
¡û
>W141139598
AWNV01000008
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
11694
11771
+
Arg
CCT
[ENA]
¡û
>W141139610
AWNV01000032
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
15441
15355
-
Leu
TAA
[ENA]
¡û
>W141139614
AWNV01000034
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
16975
16888
-
Leu
CAA
[ENA]
¡û
>W141139620
AWNV01000046
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
17791
17865
+
Pro
TGG
[ENA]
¡û
>W141139619
AWNV01000044
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
17973
17881
-
Ser
GGA
[ENA]
¡û
>W141139621
AWNV01000046
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
17987
18064
+
Arg
TCT
[ENA]
¡û
>W141139607
AWNV01000024
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
18532
18608
+
Ile
GAT
[ENA]
¡û
>W141139608
AWNV01000024
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
18620
18695
+
Ala
TGC
[ENA]
¡û
>W141139603
AWNV01000020
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
18815
18903
+
Leu
GAG
[ENA]
¡û
>W141139618
AWNV01000044
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
19448
19356
-
Ser
CGA
[ENA]
¡û
>W141139609
AWNV01000026
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
20765
20691
-
Val
GAC
[ENA]
¡û
>W141139595
AWNV01000006
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
21549
21474
-
Ala
CGC
[ENA]
¡û
>W141139604
AWNV01000021
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
23334
23260
-
Phe
GAA
[ENA]
¡û
>W141139605
AWNV01000022
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
29116
29040
-
Met
CAT
[ENA]
¡û
>W141139613
AWNV01000034
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
29281
29209
-
Gly
CCC
[ENA]
¡û
>W141139615
AWNV01000036
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
30513
30586
+
Gln
CTG
[ENA]
¡û
>W141139606
AWNV01000023
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
32370
32295
-
Ala
GGC
[ENA]
¡û
>W141139601
AWNV01000015
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
45116
45040
-
Pro
GGG
[ENA]
¡û
>W141139602
AWNV01000017
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
49092
48998
-
Ser
GCT
[ENA]
¡û
>W141139599
AWNV01000013
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
53229
53303
+
Gly
GCC
[ENA]
¡û
>W141139600
AWNV01000013
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
55069
55144
+
Cys
GCA
[ENA]
¡û
>W141139591
AWNV01000006
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
55805
55879
+
Lys
TTT
[ENA]
¡û
>W141139592
AWNV01000006
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
55890
55965
+
Glu
TTC
[ENA]
¡û
>W141139594
AWNV01000006
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
61561
61487
-
Val
TAC
[ENA]
¡û
>W141139589
AWNV01000005
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
62063
62138
+
Arg
TCG
[ENA]
¡û
>W141139597
AWNV01000007
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
74082
73996
-
Leu
CAG
[ENA]
¡û
>W141139590
AWNV01000005
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
75497
75571
+
Lys
CTT
[ENA]
¡û
>W141139593
AWNV01000006
Aminicenantes
Candidatus Aminicenans sakinawicola JGI OTU-1 [AWNV]
81133
81209
+
Asp
GTC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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