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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
CandidatusTagabacteria
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W1910738804
MHQZ01000010
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
100
27
-
Gln
CTG
[ENA]
¡û
>W1910738809
MHQZ01000020
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
114
27
-
Leu
TAA
[ENA]
¡û
>W1910738820
MHQZ01000035
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
158
230
+
Gln
TTG
[ENA]
¡û
>W1910738808
MHQZ01000020
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
282
208
-
Cys
GCA
[ENA]
¡û
>W1910738813
MHQZ01000028
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
532
605
+
Ala
GGC
[ENA]
¡û
>W1910738814
MHQZ01000028
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
776
848
+
Gly
GCC
[ENA]
¡û
>W1910738826
MHQZ01000040
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
917
843
-
Trp
CCA
[ENA]
¡û
>W1910738823
MHQZ01000037
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
1051
980
-
Arg
CCT
[ENA]
¡û
>W1910738819
MHQZ01000032
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
1118
1202
+
Leu
GAG
[ENA]
¡û
>W1910738821
MHQZ01000036
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
1271
1197
-
Thr
TGT
[ENA]
¡û
>W1910738825
MHQZ01000040
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
1419
1348
-
Thr
GGT
[ENA]
¡û
>W1910738816
MHQZ01000030
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
1468
1539
+
Phe
GAA
[ENA]
¡û
>W1910738817
MHQZ01000030
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
1864
1789
-
Asp
GTC
[ENA]
¡û
>W1910738818
MHQZ01000031
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
2281
2356
+
Met
CAT
[ENA]
¡û
>W1910738815
MHQZ01000028
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
2623
2697
+
Ala
TGC
[ENA]
¡û
>W1910738824
MHQZ01000040
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
3075
2991
-
Tyr
GTA
[ENA]
¡û
>W1930016861
MHQZ01000032
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
4902
4973
+
His
GTG
[ENA]
¡û
>W1910738807
MHQZ01000018
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
5561
5632
+
Val
CAC
[ENA]
¡û
>W1910738806
MHQZ01000017
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
6507
6432
-
Pro
GGG
[ENA]
¡û
>W1910738802
MHQZ01000007
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
8095
8168
+
Thr
GGT
[ENA]
¡û
>W1910738803
MHQZ01000007
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
8181
8264
+
Tyr
GTA
[ENA]
¡û
>W1910738811
MHQZ01000022
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
8332
8404
+
Arg
TCT
[ENA]
¡û
>W1910738812
MHQZ01000022
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
8581
8655
+
Val
TAC
[ENA]
¡û
>W1910738805
MHQZ01000012
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
10042
10112
+
Pro
TGG
[ENA]
¡û
>W1910738801
MHQZ01000002
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
10300
10379
+
Leu
CAG
[ENA]
¡û
>W1910738822
MHQZ01000037
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
12059
12142
+
Leu
CAA
[ENA]
¡û
>W1910738810
MHQZ01000021
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
12576
12649
+
Lys
TTT
[ENA]
¡û
>W1910738827
MHQZ01000045
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_39_11 (MHQZ)
18672
18762
+
Ser
GCT
[ENA]
¡û
>W1910738848
MHRA01000029
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
2294
2381
+
Ser
GGA
[ENA]
¡û
>W1910738828
MHRA01000001
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
2550
2622
+
Glu
CTC
[ENA]
¡û
>W1910738845
MHRA01000022
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
2572
2644
+
Val
GAC
[ENA]
¡û
>W1910738854
MHRA01000041
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
2596
2521
-
Val
CAC
[ENA]
¡û
>W1920000531
MHRA01000010
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
2808
2878
+
Pro
TGG
[ENA]
¡û
>W1910738834
MHRA01000010
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
3290
3361
+
Gly
TCC
[ENA]
¡û
>W1910738846
MHRA01000022
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
3954
4037
+
Leu
GAG
[ENA]
¡û
>W1910738832
MHRA01000008
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
4138
4223
+
Leu
CAG
[ENA]
¡û
>W1910738839
MHRA01000017
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
4484
4570
+
Leu
CAA
[ENA]
¡û
>W1910738852
MHRA01000038
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
4708
4781
+
Arg
TCT
[ENA]
¡û
>W1910738849
MHRA01000029
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
4724
4796
+
Thr
GGT
[ENA]
¡û
>W1910738853
MHRA01000038
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
4858
4930
+
Val
TAC
[ENA]
¡û
>W1910738850
MHRA01000029
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
4862
4934
+
Thr
CGT
[ENA]
¡û
>W1910738855
MHRA01000045
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
5373
5297
-
Lys
TTT
[ENA]
¡û
>W1910738847
MHRA01000026
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
6024
5951
-
Lys
CTT
[ENA]
¡û
>W1910738851
MHRA01000033
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
6213
6285
+
Arg
GCG
[ENA]
¡û
>W1910738838
MHRA01000015
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
6846
6917
+
Thr
TGT
[ENA]
¡û
>W1910738841
MHRA01000019
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
7917
7991
+
Cys
GCA
[ENA]
¡û
>W1910738842
MHRA01000019
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
8123
8208
+
Leu
TAG
[ENA]
¡û
>W1910738840
MHRA01000017
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
11924
11853
-
Trp
CCA
[ENA]
¡û
>W1910738835
MHRA01000010
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
14859
14931
+
Glu
TTC
[ENA]
¡û
>W1910738837
MHRA01000014
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
15548
15618
+
Ala
CGC
[ENA]
¡û
>W1910738836
MHRA01000010
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
16375
16461
+
Ser
CGA
[ENA]
¡û
>W1910738843
MHRA01000020
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
17520
17610
+
Ser
GCT
[ENA]
¡û
>W1910738831
MHRA01000002
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
21004
20933
-
His
GTG
[ENA]
¡û
>W1910738844
MHRA01000020
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
21592
21679
+
Ser
TGA
[ENA]
¡û
>W1910738829
MHRA01000002
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
22682
22753
+
Arg
TCG
[ENA]
¡û
>W1910738830
MHRA01000002
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
24411
24481
+
Pro
CGG
[ENA]
¡û
>W1910738833
MHRA01000008
CandidatusTagabacteria
Candidatus Tagabacteria bacterium RIFCSPLOWO2_01_FULL_42_9 (MHRA)
34756
34831
+
Met
CAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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