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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
Haloplasmatales
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W11168151
AFNU01000026
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
18
91
+
Cys
GCA
[ENA]
¡û
>W11168176
AFNU01000062
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
29
105
+
Ile
GAT
[ENA]
¡û
>W11168195
AFNU01000105
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
74
1
-
Gly
TCC
[ENA]
¡û
>W11168196
AFNU01000106
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
76
160
+
Tyr
GTA
[ENA]
¡û
>W11168179
AFNU01000084
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
82
157
+
Lys
TTT
[ENA]
¡û
>W11168150
AFNU01000016
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
94
2
-
Ser
TGA
[ENA]
¡û
>W11168152
AFNU01000026
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
104
192
+
Leu
TAA
[ENA]
¡û
>W11168177
AFNU01000062
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
115
190
+
Ala
TGC
[ENA]
¡û
>W11168187
AFNU01000092
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
122
197
+
Val
TAC
[ENA]
¡û
>W11168180
AFNU01000084
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
163
251
+
Leu
TAA
[ENA]
¡û
>W11168197
AFNU01000106
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
169
242
+
Trp
CCA
[ENA]
¡û
>W11168194
AFNU01000105
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
178
102
-
Pro
TGG
[ENA]
¡û
>W11168149
AFNU01000016
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
191
115
-
Met
CAT
[ENA]
¡û
>W11168188
AFNU01000092
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
205
281
+
Thr
TGT
[ENA]
¡û
>W11168198
AFNU01000106
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
254
329
+
His
GTG
[ENA]
¡û
>W11168181
AFNU01000084
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
257
333
+
Met
CAT
[ENA]
¡û
>W11168193
AFNU01000105
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
271
195
-
Arg
ACG
[ENA]
¡û
>W11168148
AFNU01000016
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
283
207
-
Met
CAT
[ENA]
¡û
>W11168189
AFNU01000092
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
288
372
+
Tyr
GTA
[ENA]
¡û
>W11168182
AFNU01000084
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
349
425
+
Met
CAT
[ENA]
¡û
>W11168192
AFNU01000105
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
355
280
-
Asp
GTC
[ENA]
¡û
>W11168190
AFNU01000092
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
381
454
+
Trp
CCA
[ENA]
¡û
>W11168183
AFNU01000084
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
446
538
+
Ser
TGA
[ENA]
¡û
>W11168191
AFNU01000092
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
466
541
+
His
GTG
[ENA]
¡û
>W11168184
AFNU01000084
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
566
642
+
Met
CAT
[ENA]
¡û
>W11168185
AFNU01000084
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
646
721
+
Asp
GTC
[ENA]
¡û
>W11168186
AFNU01000084
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
726
801
+
Phe
GAA
[ENA]
¡û
>W11168178
AFNU01000075
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
1878
1790
-
Leu
TAA
[ENA]
¡û
>W11168169
AFNU01000058
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
4417
4509
+
Ser
GCT
[ENA]
¡û
>W11168170
AFNU01000058
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
4522
4597
+
Glu
TTC
[ENA]
¡û
>W11168171
AFNU01000058
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
4627
4702
+
Val
TAC
[ENA]
¡û
>W11168172
AFNU01000058
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
4707
4783
+
Thr
TGT
[ENA]
¡û
>W11168173
AFNU01000058
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
4797
4881
+
Tyr
GTA
[ENA]
¡û
>W11168174
AFNU01000058
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
4898
4972
+
Gln
TTG
[ENA]
¡û
>W11168175
AFNU01000058
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
4977
5050
+
Gly
TCC
[ENA]
¡û
>W11168168
AFNU01000054
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
6258
6167
-
Ser
GGA
[ENA]
¡û
>W11168156
AFNU01000030
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
19013
18931
-
Leu
TAG
[ENA]
¡û
>W11168146
AFNU01000010
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
19013
18931
-
Leu
TAG
[ENA]
¡û
>W11168155
AFNU01000030
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
19125
19050
-
Lys
TTT
[ENA]
¡û
>W11168154
AFNU01000030
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
19212
19136
-
Thr
TGT
[ENA]
¡û
>W11168153
AFNU01000030
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
19295
19220
-
Val
TAC
[ENA]
¡û
>W11168147
AFNU01000014
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
19923
19848
-
Phe
GAA
[ENA]
¡û
>W11168159
AFNU01000035
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
19969
19894
-
Phe
GAA
[ENA]
¡û
>W11168158
AFNU01000035
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
20877
20801
-
Met
CAT
[ENA]
¡û
>W11168157
AFNU01000035
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
42215
42123
-
Ser
TGA
[ENA]
¡û
>W11168162
AFNU01000042
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
120590
120663
+
Cys
GCA
[ENA]
¡û
>W11168163
AFNU01000042
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
167360
167456
+
SeC(p)
TCA
[ENA]
¡û
>W11168164
AFNU01000042
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
290159
290244
+
Leu
GAG
[ENA]
¡û
>W11168165
AFNU01000042
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
307853
307927
+
Thr
GGT
[ENA]
¡û
>W11168161
AFNU01000039
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
399604
399528
-
Arg
TCT
[ENA]
¡û
>W11168160
AFNU01000039
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
400443
400370
-
Gly
TCC
[ENA]
¡û
>W11168167
AFNU01000042
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
413141
413055
-
Leu
CAA
[ENA]
¡û
>W11168166
AFNU01000042
Haloplasmatales
Haloplasma contractile SSD-17B [AFNU]
414778
414702
-
Arg
TCG
[ENA]
¡û
>W1911245779
NSKI01000071
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
265
340
+
Val
TAC
[ENA]
¡û
>W1911245780
NSKI01000071
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
345
420
+
Lys
TTT
[ENA]
¡û
>W1911245781
NSKI01000071
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
437
521
+
Leu
TAG
[ENA]
¡û
>W1911245782
NSKI01000071
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
529
602
+
Gly
TCC
[ENA]
¡û
>W1911245763
NSKI01000022
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
7363
7436
+
Gly
TCC
[ENA]
¡û
>W1911245762
NSKI01000019
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
8332
8258
-
Thr
GGT
[ENA]
¡û
>W1911245764
NSKI01000022
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
8431
8355
-
Arg
TCT
[ENA]
¡û
>W1911245778
NSKI01000027
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
12159
12255
+
Sec
TCA
[ENA]
¡û
>W1911245761
NSKI01000019
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
12880
12796
-
Leu
GAG
[ENA]
¡û
>W1911245760
NSKI01000015
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
22511
22586
+
Arg
CCT
[ENA]
¡û
>W1911245777
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
33736
33661
-
Phe
GAA
[ENA]
¡û
>W1911245776
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
33899
33823
-
Met
CAT
[ENA]
¡û
>W1911245775
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34014
33922
-
Ser
TGA
[ENA]
¡û
>W1911245774
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34108
34032
-
Met
CAT
[ENA]
¡û
>W1911245773
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34197
34121
-
Met
CAT
[ENA]
¡û
>W1911245772
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34295
34207
-
Leu
TAA
[ENA]
¡û
>W1911245771
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34387
34312
-
Lys
TTT
[ENA]
¡û
>W1911245770
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34470
34396
-
Gln
TTG
[ENA]
¡û
>W1911245769
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34556
34481
-
His
GTG
[ENA]
¡û
>W1911245768
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34647
34574
-
Trp
CCA
[ENA]
¡û
>W1911245767
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34737
34653
-
Tyr
GTA
[ENA]
¡û
>W1911245766
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34822
34747
-
Thr
TGT
[ENA]
¡û
>W1911245765
NSKI01000025
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
34904
34829
-
Val
TAC
[ENA]
¡û
>W1911245755
NSKI01000010
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
74950
75040
+
Ser
GCT
[ENA]
¡û
>W1911245756
NSKI01000010
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
75062
75137
+
Thr
TGT
[ENA]
¡û
>W1911245757
NSKI01000010
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
75149
75233
+
Tyr
GTA
[ENA]
¡û
>W1911245758
NSKI01000010
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
75241
75315
+
Gln
TTG
[ENA]
¡û
>W1911245759
NSKI01000010
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
75323
75396
+
Gly
TCC
[ENA]
¡û
>W1911245752
NSKI01000006
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
91920
92012
+
Ser
TGA
[ENA]
¡û
>W1911245753
NSKI01000006
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
106530
106606
+
Met
CAT
[ENA]
¡û
>W1911245754
NSKI01000006
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
106693
106768
+
Phe
GAA
[ENA]
¡û
>W1911245751
NSKI01000001
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
142649
142563
-
Leu
CAA
[ENA]
¡û
>W1911245750
NSKI01000001
Haloplasmatales
Inordinaticella fortuita 4B (NSKI)
143572
143497
-
Arg
CCG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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