This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
Ktedonobacteria
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W11125187
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
118
46
-
Gly
CCC
[ENA]
¡û
>W10119015
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
118
46
-
Gly
CCC
[ENA]
¡û
>W10119016
ADVG01000009
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2508
2593
+
Leu
TAG
[ENA]
¡û
>W11125188
ADVG01000009
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2508
2593
+
Leu
TAG
[ENA]
¡û
>W10119017
ADVG01000009
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2668
2742
+
Gly
GCC
[ENA]
¡û
>W11125189
ADVG01000009
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2668
2742
+
Gly
GCC
[ENA]
¡û
>W11125190
ADVG01000009
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2967
3041
+
Gly
GCC
[ENA]
¡û
>W10119018
ADVG01000009
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2967
3041
+
Gly
GCC
[ENA]
¡û
>W11125151
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
11825
11898
+
Thr
CGT
[ENA]
¡û
>W10118979
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
11825
11898
+
Thr
CGT
[ENA]
¡û
>W10119014
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
65787
65710
-
His
GTG
[ENA]
¡û
>W11125186
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
65787
65710
-
His
GTG
[ENA]
¡û
>W11125185
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
176340
176268
-
Met
CAT
[ENA]
¡û
>W10119013
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
176340
176268
-
Met
CAT
[ENA]
¡û
>W11125184
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
203252
203179
-
Gln
TTG
[ENA]
¡û
>W10119012
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
203252
203179
-
Gln
TTG
[ENA]
¡û
>W11125152
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
273545
273628
+
Leu
CAA
[ENA]
¡û
>W10118980
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
273545
273628
+
Leu
CAA
[ENA]
¡û
>W10119011
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
393196
393123
-
Glu
TTC
[ENA]
¡û
>W11125183
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
393196
393123
-
Glu
TTC
[ENA]
¡û
>W11125182
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
953897
953825
-
Gly
TCC
[ENA]
¡û
>W10119010
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
953897
953825
-
Gly
TCC
[ENA]
¡û
>W10119009
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
953974
953899
-
Pro
TGG
[ENA]
¡û
>W11125181
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
953974
953899
-
Pro
TGG
[ENA]
¡û
>W11300672
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1274115
1274188
+
Val
GAC
[ENA]
¡û
>W10300472
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1274115
1274188
+
Val
GAC
[ENA]
¡û
>W10119008
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1331101
1331026
-
Arg
GCG
[ENA]
¡û
>W11125180
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1331101
1331026
-
Arg
GCG
[ENA]
¡û
>W11125179
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1331228
1331153
-
Arg
GCG
[ENA]
¡û
>W10119007
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1331228
1331153
-
Arg
GCG
[ENA]
¡û
>W10118981
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1369238
1369314
+
Glu
TTC
[ENA]
¡û
>W11125153
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1369238
1369314
+
Glu
TTC
[ENA]
¡û
>W11125178
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1373677
1373593
-
Ser
TGA
[ENA]
¡û
>W10119006
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1373677
1373593
-
Ser
TGA
[ENA]
¡û
>W10118964
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1442057
1442133
+
Glu
CTC
[ENA]
¡û
>W11125136
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1442057
1442133
+
Glu
CTC
[ENA]
¡û
>W11125137
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1442210
1442286
+
Glu
CTC
[ENA]
¡û
>W10118965
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1442210
1442286
+
Glu
CTC
[ENA]
¡û
>W10119005
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1456489
1456418
-
Arg
CCG
[ENA]
¡û
>W11125177
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1456489
1456418
-
Arg
CCG
[ENA]
¡û
>W11125154
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1580320
1580408
+
Leu
CAG
[ENA]
¡û
>W10118982
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1580320
1580408
+
Leu
CAG
[ENA]
¡û
>W11125155
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1580724
1580808
+
Leu
CAG
[ENA]
¡û
>W10118983
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1580724
1580808
+
Leu
CAG
[ENA]
¡û
>W10200019
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1639230
1639133
-
seC
TCA
[ENA]
¡û
>W11125156
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1658096
1658184
+
Ser
GCT
[ENA]
¡û
>W10118984
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1658096
1658184
+
Ser
GCT
[ENA]
¡û
>W11125157
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1658226
1658298
+
Trp
CCA
[ENA]
¡û
>W10118985
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1658226
1658298
+
Trp
CCA
[ENA]
¡û
>W10118986
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1782316
1782391
+
Ala
CGC
[ENA]
¡û
>W11125158
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1782316
1782391
+
Ala
CGC
[ENA]
¡û
>W10118987
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1782692
1782767
+
Ala
GGC
[ENA]
¡û
>W11125159
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1782692
1782767
+
Ala
GGC
[ENA]
¡û
>W10118978
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1938534
1938463
-
Val
CAC
[ENA]
¡û
>W11125150
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
1938534
1938463
-
Val
CAC
[ENA]
¡û
>W11125176
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2152718
2152645
-
Ile
GAT
[ENA]
¡û
>W10119004
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2152718
2152645
-
Ile
GAT
[ENA]
¡û
>W11125175
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2152972
2152897
-
Ala
TGC
[ENA]
¡û
>W10119003
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2152972
2152897
-
Ala
TGC
[ENA]
¡û
>W11125174
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2153064
2152991
-
Ile
GAT
[ENA]
¡û
>W10119002
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2153064
2152991
-
Ile
GAT
[ENA]
¡û
>W10119001
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2172693
2172617
-
Pro
GGG
[ENA]
¡û
>W11125173
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2172693
2172617
-
Pro
GGG
[ENA]
¡û
>W10118966
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2262916
2262989
+
Arg
TCG
[ENA]
¡û
>W11125138
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2262916
2262989
+
Arg
TCG
[ENA]
¡û
>W10119000
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2393088
2393015
-
Arg
CCT
[ENA]
¡û
>W11125172
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2393088
2393015
-
Arg
CCT
[ENA]
¡û
>W10118988
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2408440
2408516
+
Pro
CGG
[ENA]
¡û
>W11125160
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2408440
2408516
+
Pro
CGG
[ENA]
¡û
>W11125161
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2455732
2455808
+
Thr
TGT
[ENA]
¡û
>W10118989
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2455732
2455808
+
Thr
TGT
[ENA]
¡û
>W11125162
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2518270
2518343
+
Ile
TAT
[ENA]
¡û
>W10118990
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2518270
2518343
+
Ile
TAT
[ENA]
¡û
>W11300673
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2529266
2529193
-
Glu
TTC
[ENA]
¡û
>W11125171
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2531050
2530973
-
Met
CAT
[ENA]
¡û
>W10118999
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2531050
2530973
-
Met
CAT
[ENA]
¡û
>W11125170
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2531217
2531142
-
Met
CAT
[ENA]
¡û
>W10118998
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2531217
2531142
-
Met
CAT
[ENA]
¡û
>W10118997
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2531317
2531242
-
Met
CAT
[ENA]
¡û
>W11125169
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2531317
2531242
-
Met
CAT
[ENA]
¡û
>W11125168
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2577704
2577630
-
Lys
CTT
[ENA]
¡û
>W10118996
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2577704
2577630
-
Lys
CTT
[ENA]
¡û
>W11125149
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2657038
2656964
-
Asp
GTC
[ENA]
¡û
>W10118977
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2657038
2656964
-
Asp
GTC
[ENA]
¡û
>W10118995
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2747685
2747611
-
Asn
GTT
[ENA]
¡û
>W11125167
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2747685
2747611
-
Asn
GTT
[ENA]
¡û
>W10118991
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2801621
2801702
+
Leu
GAG
[ENA]
¡û
>W11125163
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2801621
2801702
+
Leu
GAG
[ENA]
¡û
>W11125164
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2801771
2801847
+
Val
TAC
[ENA]
¡û
>W10118992
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2801771
2801847
+
Val
TAC
[ENA]
¡û
>W10118993
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2875711
2875794
+
Tyr
GTA
[ENA]
¡û
>W11125165
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2875711
2875794
+
Tyr
GTA
[ENA]
¡û
>W10118994
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2875820
2875894
+
Thr
GGT
[ENA]
¡û
>W11125166
ADVG01000002
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2875820
2875894
+
Thr
GGT
[ENA]
¡û
>W11300671
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2879635
2879561
-
Ala
GGC
[ENA]
¡û
>W10118976
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2960735
2960658
-
Arg
TCT
[ENA]
¡û
>W11125148
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
2960735
2960658
-
Arg
TCT
[ENA]
¡û
>W11125147
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3026160
3026072
-
Ser
GGA
[ENA]
¡û
>W10118975
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3026160
3026072
-
Ser
GGA
[ENA]
¡û
>W11125146
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3026254
3026168
-
Ser
CGA
[ENA]
¡û
>W10118974
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3026254
3026168
-
Ser
CGA
[ENA]
¡û
>W11125145
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3118479
3118406
-
Cys
GCA
[ENA]
¡û
>W10118973
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3118479
3118406
-
Cys
GCA
[ENA]
¡û
>W10118972
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3118563
3118489
-
Gly
GCC
[ENA]
¡û
>W11125144
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3118563
3118489
-
Gly
GCC
[ENA]
¡û
>W11125139
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3149694
3149779
+
Leu
TAA
[ENA]
¡û
>W10118967
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3149694
3149779
+
Leu
TAA
[ENA]
¡û
>W10118968
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3256194
3256269
+
Gln
CTG
[ENA]
¡û
>W11125140
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3256194
3256269
+
Gln
CTG
[ENA]
¡û
>W10118969
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3256331
3256406
+
Gln
CTG
[ENA]
¡û
>W11125141
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3256331
3256406
+
Gln
CTG
[ENA]
¡û
>W11125142
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3758249
3758322
+
Phe
GAA
[ENA]
¡û
>W10118970
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3758249
3758322
+
Phe
GAA
[ENA]
¡û
>W10118971
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3828888
3828961
+
Lys
TTT
[ENA]
¡û
>W11125143
ADVG01000001
Ktedonobacteria
Ktedonobacter racemifer DSM 44963 [ADVG]
3828888
3828961
+
Lys
TTT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK