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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
Thermobaculum
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>C10113756
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
122578
122653
+
Ala
GGC
[Ensembl]
¡û
>C10113757
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
122660
122746
+
Leu
CAG
[Ensembl]
¡û
>C10113806
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
176533
176457
-
Leu
TAA
[Ensembl]
¡û
>C10113805
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
180650
180576
-
Glu
TTC
[Ensembl]
¡û
>C10113804
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
180769
180693
-
Glu
CTC
[Ensembl]
¡û
>C10113758
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
326571
326645
+
Asn
GTT
[Ensembl]
¡û
>C10113759
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
491425
491500
+
Trp
CCA
[Ensembl]
¡û
>C10113760
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
568360
568436
+
Arg
TCT
[Ensembl]
¡û
>C10113761
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
675654
675730
+
Val
GAC
[Ensembl]
¡û
>C10113803
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
688643
688567
-
His
GTG
[Ensembl]
¡û
>C10113762
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
690779
690855
+
Asp
GTC
[Ensembl]
¡û
>C10113802
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
749672
749588
-
Leu
TAG
[Ensembl]
¡û
>C10113763
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
762871
762944
+
Gly
CCC
[Ensembl]
¡û
>C10113764
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
762953
763028
+
Gly
GCC
[Ensembl]
¡û
>C10113801
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
813893
813818
-
Ala
TGC
[Ensembl]
¡û
>C10113800
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
813976
813900
-
Ile
GAT
[Ensembl]
¡û
>C10113799
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
979325
979250
-
Arg
CCT
[Ensembl]
¡û
>C10113765
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
979428
979505
+
Pro
CGG
[Ensembl]
¡û
>C10113766
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
984104
984181
+
Pro
CGG
[Ensembl]
¡û
>C10113767
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1008231
1008307
+
Pro
TGG
[Ensembl]
¡û
>C10113768
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1008319
1008392
+
Gly
TCC
[Ensembl]
¡û
>C10113798
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1025749
1025676
-
Cys
GCA
[Ensembl]
¡û
>C10113769
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1046914
1047000
+
Ser
TGA
[Ensembl]
¡û
>C10113770
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1047050
1047143
+
Ser
GCT
[Ensembl]
¡û
>C10113771
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1079015
1079090
+
Ala
CGC
[Ensembl]
¡û
>C10113772
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1125774
1125848
+
Met
CAT
[Ensembl]
¡û
>C10113773
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1125887
1125961
+
Met
CAT
[Ensembl]
¡û
>C10113774
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1133946
1134021
+
Lys
CTT
[Ensembl]
¡û
>C10113797
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1140116
1140041
-
Ala
TGC
[Ensembl]
¡û
>C10113796
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1140199
1140123
-
Ile
GAT
[Ensembl]
¡û
>C10113795
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1428160
1428084
-
Arg
GCG
[Ensembl]
¡û
>C10113775
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1544082
1544155
+
Gln
CTG
[Ensembl]
¡û
>C10113794
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1559471
1559379
-
Ser
GGA
[Ensembl]
¡û
>C10113793
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1559584
1559498
-
Ser
CGA
[Ensembl]
¡û
>C10113776
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1566624
1566698
+
Thr
CGT
[Ensembl]
¡û
>C10113792
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1573285
1573210
-
Met
CAT
[Ensembl]
¡û
>C10113791
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1616217
1616142
-
Arg
TCG
[Ensembl]
¡û
>C10113790
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1624840
1624767
-
Gln
TTG
[Ensembl]
¡û
>C10113777
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1698921
1698997
+
Val
CAC
[Ensembl]
¡û
>C10113778
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1703366
1703440
+
Val
CAC
[Ensembl]
¡û
>C10113779
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1730551
1730628
+
Lys
TTT
[Ensembl]
¡û
>C10113780
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1788871
1788969
+
SeC
TCA
[Ensembl]
¡û
>C10113781
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1815390
1815478
+
Leu
GAG
[Ensembl]
¡û
>C10113782
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1815502
1815578
+
Val
TAC
[Ensembl]
¡û
>C10113783
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1815601
1815676
+
Phe
GAA
[Ensembl]
¡û
>C10113784
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1933078
1933163
+
Leu
CAA
[Ensembl]
¡û
>C10113789
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1960524
1960448
-
Pro
GGG
[Ensembl]
¡û
>C10113788
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1965483
1965408
-
Thr
GGT
[Ensembl]
¡û
>C10113787
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1965588
1965503
-
Tyr
GTA
[Ensembl]
¡û
>C10113786
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1965672
1965598
-
Thr
TGT
[Ensembl]
¡û
>C10113785
CP001825
Thermobaculum
Thermobaculum terrenum ATCC BAA-798
1997715
1997638
-
Arg
CCG
[Ensembl]
¡û
>W09110179
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
145
70
-
Thr
GGT
[ENA]
¡û
>W09110178
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
250
165
-
Tyr
GTA
[ENA]
¡û
>W09110177
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
334
260
-
Thr
TGT
[ENA]
¡û
>W09110176
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
32377
32300
-
Arg
CCG
[ENA]
¡û
>W09110162
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
184187
184262
+
Ala
GGC
[ENA]
¡û
>W09110163
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
184269
184355
+
Leu
CAG
[ENA]
¡û
>W09110175
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
238143
238067
-
Leu
TAA
[ENA]
¡û
>W09110174
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
242260
242186
-
Glu
TTC
[ENA]
¡û
>W09110173
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
242379
242303
-
Glu
CTC
[ENA]
¡û
>W09110164
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
388179
388253
+
Asn
GTT
[ENA]
¡û
>W09110165
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
553032
553107
+
Trp
CCA
[ENA]
¡û
>W09110166
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
629965
630041
+
Arg
TCT
[ENA]
¡û
>W09110167
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
737229
737305
+
Val
GAC
[ENA]
¡û
>W09110172
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
750218
750142
-
His
GTG
[ENA]
¡û
>W09110168
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
752354
752430
+
Asp
GTC
[ENA]
¡û
>W09110171
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
811247
811163
-
Leu
TAG
[ENA]
¡û
>W09110169
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
824444
824517
+
Gly
CCC
[ENA]
¡û
>W09110170
ABUX01000001
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
824526
824601
+
Gly
GCC
[ENA]
¡û
>W09110190
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
4519
4442
-
Lys
TTT
[ENA]
¡û
>W09110189
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
31705
31631
-
Val
CAC
[ENA]
¡û
>W09110188
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
36150
36074
-
Val
CAC
[ENA]
¡û
>W09110180
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
110231
110304
+
Gln
TTG
[ENA]
¡û
>W09110181
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
118854
118929
+
Arg
TCG
[ENA]
¡û
>W09110182
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
161786
161861
+
Met
CAT
[ENA]
¡û
>W09110187
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
168447
168373
-
Thr
CGT
[ENA]
¡û
>W09110183
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
175487
175573
+
Ser
CGA
[ENA]
¡û
>W09110184
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
175600
175692
+
Ser
GGA
[ENA]
¡û
>W09110186
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
190989
190916
-
Gln
CTG
[ENA]
¡û
>W09110185
ABUX01000002
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
306913
306989
+
Arg
GCG
[ENA]
¡û
>W09110191
ABUX01000003
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
54234
54332
+
SeC
TCA
[ENA]
¡û
>W09110192
ABUX01000003
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
80753
80841
+
Leu
GAG
[ENA]
¡û
>W09110193
ABUX01000003
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
80865
80941
+
Val
TAC
[ENA]
¡û
>W09110194
ABUX01000003
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
80964
81039
+
Phe
GAA
[ENA]
¡û
>W09110206
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
3341
3266
-
Lys
CTT
[ENA]
¡û
>W09110205
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
11400
11326
-
Met
CAT
[ENA]
¡û
>W09110204
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
11513
11439
-
Met
CAT
[ENA]
¡û
>W09110203
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
58272
58197
-
Ala
CGC
[ENA]
¡û
>W09110202
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
90237
90144
-
Ser
GCT
[ENA]
¡û
>W09110201
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
90373
90287
-
Ser
TGA
[ENA]
¡û
>W09110195
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
111537
111610
+
Cys
GCA
[ENA]
¡û
>W09110200
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
128967
128894
-
Gly
TCC
[ENA]
¡û
>W09110199
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
129055
128979
-
Pro
TGG
[ENA]
¡û
>W09110198
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
153182
153105
-
Pro
CGG
[ENA]
¡û
>W09110197
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
157858
157781
-
Pro
CGG
[ENA]
¡û
>W09110196
ABUX01000004
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
157961
158036
+
Arg
CCT
[ENA]
¡û
>W09110207
ABUX01000009
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
3618
3694
+
Pro
GGG
[ENA]
¡û
>W09110208
ABUX01000009
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
31063
30978
-
Leu
CAA
[ENA]
¡û
>W09110210
ABUX01000010
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
27606
27531
-
Ala
TGC
[ENA]
¡û
>W09110209
ABUX01000010
Thermobaculum
Thermobaculum terrenum ATCC BAA-798 [ABUX]
27689
27613
-
Ile
GAT
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK