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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
candidate division OP1
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>W131193335
ASOB01000083
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
486
557
+
Thr
CGT
[ENA]
¡û
>W131193332
ASOB01000012
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
1160
1086
-
Ile
GAT
[ENA]
¡û
>W131193326
ASOB01000011
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
2492
2565
+
Lys
CTT
[ENA]
¡û
>W131193327
ASOB01000011
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
2587
2662
+
Lys
TTT
[ENA]
¡û
>W131193328
ASOB01000011
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
2710
2785
+
Glu
TTC
[ENA]
¡û
>W131193329
ASOB01000011
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
2826
2900
+
Val
TAC
[ENA]
¡û
>W131193330
ASOB01000011
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
2912
2988
+
Asp
GTC
[ENA]
¡û
>W131193331
ASOB01000011
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
2997
3072
+
Phe
GAA
[ENA]
¡û
>W131193334
ASOB01000044
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
5253
5182
-
Met
CAT
[ENA]
¡û
>W131193333
ASOB01000025
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
10193
10122
-
Gly
CCC
[ENA]
¡û
>W131193325
ASOB01000003
candidate division OP1
candidate division OP1 bacterium SCGC AAA255-C06 [ASOB]
23377
23304
-
Ala
GGC
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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