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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.105103 (9 seq.)
>W131227661
AUFI01000008
Actinomycetota
Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837 [AUFI]
131420
131336
-
Tyr
GTA
[ENA]
¡û
>W141525301
JGZT01000006
Actinomycetota
Bifidobacterium thermacidophilum subsp. thermacidophilum [JGZT]
131367
131283
-
Tyr
GTA
[ENA]
¡û
>W1910828874
MWWQ01000001
Actinomycetota
Pseudoscardovia suis DSM 24744 [MWWQ]
182102
182184
+
Tyr
GTA
[ENA]
¡û
>W1910828958
MWWR01000023
Actinomycetota
Pseudoscardovia radai DSM 24742 [MWWR]
7430
7348
-
Tyr
GTA
[ENA]
¡û
>W1810089989
PGFC01000005
Actinomycetota
Pseudoscardovia suis DSM 24744 [PGFC]
6609
6527
-
Tyr
GTA
[ENA]
¡û
>W2010921123
MWWQ01000001
Actinomycetota
Pseudoscardovia suis DSM 24744 [MWWQ]
182102
182184
+
Tyr
GTA
[ENA]
¡û
>W2010921207
MWWR01000023
Actinomycetota
Pseudoscardovia radai DSM 24742 [MWWR]
7430
7348
-
Tyr
GTA
[ENA]
¡û
>W1610518673
JDTO01000004
Actinomycetota
Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837 [JDTO]
10989
10905
-
Tyr
GTA
[ENA]
¡û
>W1710614193
JDTO01000004
Actinomycetota
Bifidobacterium thermacidophilum subsp. thermacidophilum DSM 15837 [JDTO]
10989
10905
-
Tyr
GTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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