This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.111438 (4 seq.)
>W141142558
AWQU01000060
Mycoplasmatota
Malacoplasma iowae DK-CPA [AWQU]
6521
6606
+
Leu
CAA
[ENA]
¡û
>C191218168
LR214962
Mycoplasmatota
Mycoplasmopsis fermentans NCTC10117 [LR214955, LR214962]
896245
896160
-
Leu
CAA
-
¡û
>C191218428
LR215023
Mycoplasmatota
Malacoplasma iowae NCTC10185 [LR215023]
576863
576778
-
Leu
CAA
-
¡û
>W11178976
AGFP01000034
Mycoplasmatota
Malacoplasma iowae 695 [AGFP]
647
562
-
Leu
CAA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
BACK