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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes clustered and arranged according to each identical group
HIT:
1 Group(s).
Download Sequence
Representative sequence of each cluster
View ClustalW result
Sort by Identical group No.
Sort by the number of tRNAs in the Identical group
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Identical group No.115318 (4 seq.)
>W1711171795
LWBL02000065
Bacillota
Bacillus marinisedimentorum NC2-31 [LWBL]
50124
50040
-
Tyr
GTA
[ENA]
¡û
>W1711171809
LWBL02000068
Bacillota
Bacillus marinisedimentorum NC2-31 [LWBL]
53262
53178
-
Tyr
GTA
[ENA]
¡û
>W1711171827
LWBL02000081
Bacillota
Bacillus marinisedimentorum NC2-31 [LWBL]
9125
9041
-
Tyr
GTA
[ENA]
¡û
>W1610980586
LWBL01000028
Bacillota
Bacillus marinisedimentorum NC2-31 [LWBL]
53262
53178
-
Tyr
GTA
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
Representative sequence of each cluster
View ClustalW result
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